RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 LETM1O95202 739 aaPredicted RBP9.91□□□□□ -0.82
GPN1-210ENST00000515877 FDPSP14324 419 aaKnown RBP9.91□□□□□ -0.82
GPN1-210ENST00000515877 USP5P45974 858 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 MFSD14BQ5SR56 506 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 MICU3Q86XE3 530 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 WASF1Q92558 559 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 HLA-CQ95604 372 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 CNKSR1Q969H4 720 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 ZNF622Q969S3 477 aaKnown RBP eCLIP9.91□□□□□ -0.82
GPN1-210ENST00000515877 C8orf76Q96K31 380 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 ZNF396Q96N95 335 aaPredicted RBP9.91□□□□□ -0.82
GPN1-210ENST00000515877 INCENPQ9NQS7 918 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 JAG2Q9Y219 1238 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
GPN1-210ENST00000515877 ROBO3Q96MS0 1386 aa9.91□□□□□ -0.82
GPN1-210ENST00000515877 GPR75-ASB3A0A0A6YYF3 556 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 DTNBO60941 627 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 GADD45BO75293 160 aaPredicted RBP9.9□□□□□ -0.82
GPN1-210ENST00000515877 CALM1P0DP23 149 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 CALM2P0DP24 149 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 CALM3P0DP25 149 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 IARSP41252 1262 aaKnown RBP9.9□□□□□ -0.82
GPN1-210ENST00000515877 NR6A1Q15406 480 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 SEC23AQ15436 765 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 RTN1Q16799 776 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 CCDC178Q5BJE1 867 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 CC2D2BQ6DHV5 1058 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 BRAPQ7Z569 592 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 SLC51AQ86UW1 340 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 FBXO18Q8NFZ0 1043 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 NKX2-3Q8TAU0 364 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 SPATA32Q96LK8 384 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 ZSCAN10Q96SZ4 725 aaPredicted RBP9.9□□□□□ -0.82
GPN1-210ENST00000515877 RTFDC1Q9BY42 306 aaPredicted RBP9.9□□□□□ -0.82
GPN1-210ENST00000515877 ZNF287Q9HBT7 754 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 MCM9Q9NXL9 1143 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 GAKO14976 1311 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 TNKSO95271 1327 aa9.9□□□□□ -0.82
GPN1-210ENST00000515877 PSME4Q14997 1843 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 KIF13BQ9NQT8 1826 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 RANBP6O60518 1105 aaKnown RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 IFNAR1P17181 557 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 ADD1P35611 737 aaKnown RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 SSRP1Q08945 709 aaKnown RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 CCDC183Q5T5S1 534 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 C12orf60Q5U649 245 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 ZNF654Q8IZM8 581 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 SH3RF3Q8TEJ3 882 aaPredicted RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 GRPEL1Q9HAV7 217 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 TMEM63CQ9P1W3 806 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 MKRN1Q9UHC7 482 aaKnown RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 ZNF646O15015 1829 aaPredicted RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 CYP2D7A0A087X1C5 515 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 USP17L3A6NCW0 530 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 USP17L4A6NCW7 530 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 GOLGA6L4A6NEF3 574 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 RIMBP2O15034 1052 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 TCF3P15923 654 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 CDC27P30260 824 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 BTDP43251 543 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 GTF2IP78347 998 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 TRIM29Q14134 588 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 NTRK3Q16288 839 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 GRIK5Q16478 980 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 IFIT1BQ5T764 474 aaKnown RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 USP17L2Q6R6M4 530 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 USP17L1Q7RTZ2 530 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 PODNQ7Z5L7 613 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 CATIPQ7Z7H3 387 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 TTC6Q86TZ1 520 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 FAM177A1Q8N128 213 aaPredicted RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 SLC16A10Q8TF71 515 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 SENP2Q9HC62 589 aa9.89□□□□□ -0.83
GPN1-210ENST00000515877 RBM28Q9NW13 759 aaKnown RBP9.89□□□□□ -0.83
GPN1-210ENST00000515877 DDAH1O94760 285 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 NUDT7P0C024 238 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 FKBP1AP62942 108 aaKnown RBP9.88□□□□□ -0.83
GPN1-210ENST00000515877 LRSAM1Q6UWE0 723 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 RAB11FIP4Q86YS3 637 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 TEX11Q8IYF3 940 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 STK11IPQ8N1F8 1099 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 ENAHQ8N8S7 591 aaPredicted RBP9.88□□□□□ -0.83
GPN1-210ENST00000515877 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 SUPT20HQ8NEM7 779 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 GIPC2Q8TF65 315 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 TGFBRAP1Q8WUH2 860 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 ZKSCAN3Q9BRR0 538 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 ALG1Q9BT22 464 aa9.88□□□□□ -0.83
GPN1-210ENST00000515877 FAM196BA6NMK8 535 aa9.87□□□□□ -0.83
GPN1-210ENST00000515877 POLR3DP05423 398 aaPredicted RBP9.87□□□□□ -0.83
GPN1-210ENST00000515877 MARSP56192 900 aaKnown RBP9.87□□□□□ -0.83
GPN1-210ENST00000515877 NR1H3Q13133 447 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms