RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	RBM27	Q9P2N5	1060 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TFIP11	Q9UBB9	837 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RCOR1	Q9UKL0	485 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CFAP45	Q9UL16	551 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TTF2	Q9UNY4	1162 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SLX4	Q8IY92	1834 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	LAMB1	P07942	1786 aa		5.21	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DDX60L	Q5H9U9	1706 aa	Known RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	USP17L3	A6NCW0	530 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	USP17L4	A6NCW7	530 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SPDYE16	A6NNV3	312 aa	Predicted RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854		F8W031	263 aa	Predicted RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PRPF3	O43395	683 aa	Known RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	C21orf2	O43822	256 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NMT2	O60551	498 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	WDHD1	O75717	1129 aa	Predicted RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DEXI	O95424	95 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DPEP1	P16444	411 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	RASA1	P20936	1047 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CRK	P46108	304 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NOV	P48745	357 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CDK8	P49336	464 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MRE11	P49959	708 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FOSB	P53539	338 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TGFB2	P61812	414 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	GUCY1B3	Q02153	619 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KIF23	Q02241	960 aa	Predicted RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	GABPA	Q06546	454 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FUT2	Q10981	343 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	AOC3	Q16853	763 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CCDC93	Q567U6	631 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KRT40	Q6A162	431 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	OTUD7B	Q6GQQ9	843 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	APOBEC3H	Q6NTF7	200 aa	Known RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CDC42EP5	Q6NZY7	148 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	USP17L1	Q7RTZ2	530 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	BRAP	Q7Z569	592 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	RTKN2	Q8IZC4	609 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ZNF444	Q8N0Y2	327 aa	Predicted RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NEDD1	Q8NHV4	660 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NUP133	Q8WUM0	1156 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FBXW7	Q969H0	707 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TEKT1	Q969V4	418 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SYAP1	Q96A49	352 aa	Predicted RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SPATA32	Q96LK8	384 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ZDHHC15	Q96MV8	337 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	AIFM3	Q96NN9	605 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	USP28	Q96RU2	1077 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SLC26A6	Q9BXS9	759 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	RNF26	Q9BY78	433 aa	Predicted RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MKNK2	Q9HBH9	465 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	GJB4	Q9NTQ9	266 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	USP40	Q9NVE5	1235 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	RTEL1	Q9NZ71	1219 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SAP30BP	Q9UHR5	308 aa	Known RBP	5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SERPINA10	Q9UK55	444 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DLEC1	Q9Y238	1755 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CHD4	Q14839	1912 aa		5.21	□□□□□ -1.58
ATP2C1-223	ENST00000515854	YDJC	A8MPS7	323 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KIF28P	B7ZC32	967 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	UBE2Q2L	H0YL09	131 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PPIP5K2	O43314	1243 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	LETM1	O95202	739 aa	Predicted RBP	5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	YEATS4	O95619	227 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TSPY3	P0CV98	308 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TSPY8	P0CW00	308 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	U2AF2	P26368	475 aa	Known RBP eCLIP	5.2	□□□□□ -1.58	7e-6	■■■□□ 17.3
ATP2C1-223	ENST00000515854	GUCY1A2	P33402	732 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NASP	P49321	788 aa	Predicted RBP	5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SCNN1D	P51172	638 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TRIM29	Q14134	588 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PKN1	Q16512	942 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SLC4A8	Q2Y0W8	1093 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CCDC183	Q5T5S1	534 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SOGA3	Q5TF21	947 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MYSM1	Q5VVJ2	828 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	LRSAM1	Q6UWE0	723 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TMTC3	Q6ZXV5	915 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TRIM22	Q8IYM9	498 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SLC44A5	Q8NCS7	719 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PGBD1	Q96JS3	809 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	IDI2	Q9BXS1	227 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PRKD2	Q9BZL6	878 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MTFR1L	Q9H019	292 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KAT14	Q9H8E8	782 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DDX4	Q9NQI0	724 aa	Known RBP	5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MYH2	Q9UKX2	1941 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ZNF646	O15015	1829 aa	Predicted RBP	5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MYO3B	Q8WXR4	1341 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NAV1	Q8NEY1	1877 aa		5.2	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PLIN4	Q96Q06	1357 aa		5.19	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KIF13B	Q9NQT8	1826 aa		5.19	□□□□□ -1.58
ATP2C1-223	ENST00000515854	IGKV6D-41	A0A0C4DH26	115 aa		5.19	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SYCE3	A1L190	88 aa		5.19	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ZBTB7A	O95365	584 aa		5.19	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PLEKHA8P1	O95397	391 aa		5.19	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MMP1	P03956	469 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms