RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-208ENST00000514520 WIPI1Q5MNZ9 446 aaPredicted RBP6.3□□□□□ -1.4
CNGA1-208ENST00000514520 ELMO3Q96BJ8 720 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 HSPA12BQ96MM6 686 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 MIPEPQ99797 713 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 WNT10AQ9GZT5 417 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 PRDM5Q9NQX1 630 aaPredicted RBP6.3□□□□□ -1.4
CNGA1-208ENST00000514520 GTF2IRD1Q9UHL9 959 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 CYP8B1Q9UNU6 501 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 ST14Q9Y5Y6 855 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 VWDEQ8N2E2 1590 aa6.3□□□□□ -1.4
CNGA1-208ENST00000514520 INO80Q9ULG1 1556 aaPredicted RBP6.3□□□□□ -1.4
CNGA1-208ENST00000514520 DNMT1P26358 1616 aaKnown RBP6.29□□□□□ -1.4
CNGA1-208ENST00000514520 RNF17Q9BXT8 1623 aaKnown RBP6.29□□□□□ -1.4
CNGA1-208ENST00000514520 SYNMO15061 1565 aa6.29□□□□□ -1.4
CNGA1-208ENST00000514520 TOM1O60784 492 aa6.29□□□□□ -1.4
CNGA1-208ENST00000514520 LDHBP07195 334 aaKnown RBP6.29□□□□□ -1.4
CNGA1-208ENST00000514520 ZNF865P0CJ78 1059 aaPredicted RBP6.29□□□□□ -1.4
CNGA1-208ENST00000514520 FGD1P98174 961 aa6.29□□□□□ -1.4
CNGA1-208ENST00000514520 SPOCD1Q6ZMY3 1216 aa6.29□□□□□ -1.4
CNGA1-208ENST00000514520 ZSCAN29Q8IWY8 852 aaPredicted RBP6.29□□□□□ -1.4
CNGA1-208ENST00000514520 TMEM40Q8WWA1 233 aa6.29□□□□□ -1.4
CNGA1-208ENST00000514520 LIN37Q96GY3 246 aaPredicted RBP6.29□□□□□ -1.4
CNGA1-208ENST00000514520 CARS2Q9HA77 564 aaKnown RBP6.29□□□□□ -1.4
CNGA1-208ENST00000514520 PICK1Q9NRD5 415 aa6.29□□□□□ -1.4
CNGA1-208ENST00000514520 FAM135AQ9P2D6 1515 aa6.29□□□□□ -1.4
CNGA1-208ENST00000514520 GFRA2O00451 464 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 GIPC1O14908 333 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 CAP2P40123 477 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 CLCN7P51798 805 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 LRRC14Q15048 493 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 PRAMEF13Q5VWM6 474 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 SCARA3Q6AZY7 606 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 TTBK2Q6IQ55 1244 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 C22orf34Q6ZV56 151 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 ASB11Q8WXH4 323 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-208ENST00000514520 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 TTF2Q9UNY4 1162 aaKnown RBP6.28□□□□□ -1.4
CNGA1-208ENST00000514520 CDK11AQ9UQ88 783 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-208ENST00000514520 SPG7Q9UQ90 795 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 ATP7AQ04656 1500 aa6.28□□□□□ -1.4
CNGA1-208ENST00000514520 SYCP2Q9BX26 1530 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 WASH4PA8MWX3 477 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 GRK4P32298 578 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 MEI1Q5TIA1 1274 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 SV2BQ7L1I2 683 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 XAGE3Q8WTP9 111 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 FOXQ1Q9C009 403 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 DEPDC5O75140 1603 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 CDC42BPAQ5VT25 1732 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 LRRIQ1Q96JM4 1722 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 MED14O60244 1454 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 A2MP01023 1474 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 ARHGAP35Q9NRY4 1499 aa6.27□□□□□ -1.41
CNGA1-208ENST00000514520 GNAT3A8MTJ3 354 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 H3BS24 57 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 GNA15P30679 374 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 RANGAP1P46060 587 aaPredicted RBP6.26□□□□□ -1.41
CNGA1-208ENST00000514520 KCNA1Q09470 495 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 FBLN7Q53RD9 439 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 CDKAL1Q5VV42 579 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 CDC37L1Q7L3B6 337 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 TJP2Q9UDY2 1190 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 CCDC18Q5T9S5 1454 aa6.26□□□□□ -1.41
CNGA1-208ENST00000514520 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
CNGA1-208ENST00000514520 CST3P01034 146 aaPredicted RBP6.25□□□□□ -1.41
CNGA1-208ENST00000514520 KRT1P04264 644 aa6.25□□□□□ -1.41
CNGA1-208ENST00000514520 TFE3P19532 575 aaPredicted RBP6.25□□□□□ -1.41
CNGA1-208ENST00000514520 MAP3K11Q16584 847 aa6.25□□□□□ -1.41
CNGA1-208ENST00000514520 LETMD1Q6P1Q0 360 aa6.25□□□□□ -1.41
CNGA1-208ENST00000514520 MFSD4AQ8N468 514 aa6.25□□□□□ -1.41
CNGA1-208ENST00000514520 KCNK12Q9HB15 430 aa6.25□□□□□ -1.41
CNGA1-208ENST00000514520 LRRC7Q96NW7 1537 aa6.25□□□□□ -1.41
CNGA1-208ENST00000514520 ADGBQ8N7X0 1667 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 PZPP20742 1482 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 PLEKHH2Q8IVE3 1493 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 TNRQ92752 1358 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 LRRC10BA6NIK2 292 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 LIG3P49916 1009 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 ETF1P62495 437 aaKnown RBP6.24□□□□□ -1.41
CNGA1-208ENST00000514520 ATP2B2Q01814 1243 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 MLANAQ16655 118 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 SFRP5Q5T4F7 317 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 AGMOQ6ZNB7 445 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 HDXQ7Z353 690 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 KCT2Q8NC54 265 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 DUSP9Q99956 384 aaKnown RBP6.24□□□□□ -1.41
CNGA1-208ENST00000514520 FAM53CQ9NYF3 392 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 RGS17Q9UGC6 210 aaPredicted RBP6.24□□□□□ -1.41
CNGA1-208ENST00000514520 TPX2Q9ULW0 747 aaKnown RBP6.24□□□□□ -1.41
CNGA1-208ENST00000514520 KDM5DQ9BY66 1539 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 NPHP4O75161 1426 aaPredicted RBP6.24□□□□□ -1.41
CNGA1-208ENST00000514520 KIAA1107Q9UPP5 1409 aa6.24□□□□□ -1.41
CNGA1-208ENST00000514520 SPAG9O60271 1321 aaKnown RBP6.24□□□□□ -1.41
CNGA1-208ENST00000514520 IQGAP1P46940 1657 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms