RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
CLDND1-227ENST00000513452 PPP4CP60510 307 aa12.88□□□□□ -0.35
CLDND1-227ENST00000513452 MRPS5P82675 430 aaKnown RBP12.88□□□□□ -0.35
CLDND1-227ENST00000513452 IL27Q8NEV9 243 aa12.88□□□□□ -0.35
CLDND1-227ENST00000513452 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
CLDND1-227ENST00000513452 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
CLDND1-227ENST00000513452 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
CLDND1-227ENST00000513452 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
CLDND1-227ENST00000513452 STRNO43815 780 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 PGK1P00558 417 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 ERCC3P19447 782 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 PBX2P40425 430 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 DYNLL1P63167 89 aaKnown RBP12.87□□□□□ -0.35
CLDND1-227ENST00000513452 CCDC85BQ15834 202 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-227ENST00000513452 AKNAD1Q5T1N1 836 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 SPATC1LQ9H0A9 340 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
CLDND1-227ENST00000513452 A0A0G2JMZ2 1700 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 A0A1W2PQ45 241 aaPredicted RBP12.86□□□□□ -0.35
CLDND1-227ENST00000513452 A0A1W2PQY0 241 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 GRXCR1A8MXD5 290 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 RARBP10826 455 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 ABCB5Q2M3G0 1257 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 TATDN1Q6P1N9 297 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 RNF180Q86T96 592 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 SHCBP1Q8NEM2 672 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLDND1-227ENST00000513452 PBX4Q9BYU1 374 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
CLDND1-227ENST00000513452 IGFBP4P22692 258 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 FAAP100Q0VG06 881 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 PLS1Q14651 629 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 CERKLQ49MI3 558 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-227ENST00000513452 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 FAM9BQ8IZU0 186 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 SLC44A5Q8NCS7 719 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 LENG1Q96BZ8 264 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-227ENST00000513452 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 NECAB3Q96P71 396 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-227ENST00000513452 SERPINB13Q9UIV8 391 aa12.85□□□□□ -0.35
CLDND1-227ENST00000513452 NCOR1O75376 2440 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 DCDC2CA8MYV0 355 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 USP5P45974 858 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 ADGRE1Q14246 886 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 COG2Q14746 738 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 TTC39AQ5SRH9 613 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 MIGA1Q8NAN2 632 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 EHD4Q9H223 541 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 MROH8Q9H579 483 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 CABP5Q9NP86 173 aa12.84□□□□□ -0.35
CLDND1-227ENST00000513452 E9PSI1 815 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 TIMP1P01033 207 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
CLDND1-227ENST00000513452 CYP7A1P22680 504 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 MTX1Q13505 466 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 ABRAQ8N0Z2 381 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 C1QTNF1Q9BXJ1 281 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.36
CLDND1-227ENST00000513452 STARD7Q9NQZ5 370 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 HOXC10Q9NYD6 342 aa12.83□□□□□ -0.36
CLDND1-227ENST00000513452 NOB1Q9ULX3 412 aaKnown RBP12.83□□□□□ -0.36
CLDND1-227ENST00000513452 ROBO3Q96MS0 1386 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 MYH1P12882 1939 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 FCER1AP12319 257 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
CLDND1-227ENST00000513452 GUCY1A2P33402 732 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 SHMT1P34896 483 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLDND1-227ENST00000513452 SEPT2Q15019 361 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 TMEM240Q5SV17 173 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 CCDC174Q6PII3 467 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
CLDND1-227ENST00000513452 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 MB21D1Q8N884 522 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 TOX2Q96NM4 488 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
CLDND1-227ENST00000513452 NRBP1Q9UHY1 535 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 PLXNA1Q9UIW2 1896 aa12.82□□□□□ -0.36
CLDND1-227ENST00000513452 A0A1W2PRG0 241 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
CLDND1-227ENST00000513452 FLOT1O75955 427 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 PGK2P07205 417 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 GNAI3P08754 354 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 AKR1A1P14550 325 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 CSF2RAP15509 400 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 ZAP70P43403 619 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 ACLYP53396 1101 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLDND1-227ENST00000513452 RASIP1Q5U651 963 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 MFSD5Q6N075 450 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 MICALL1Q8N3F8 863 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 NUP133Q8WUM0 1156 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 ATG4CQ96DT6 458 aa12.81□□□□□ -0.36
CLDND1-227ENST00000513452 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms