RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 SYN1P17600 705 aa16.16■□□□□ 0.18
POLR2J3-217ENST00000513438 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
POLR2J3-217ENST00000513438 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
POLR2J3-217ENST00000513438 NPLOC4Q8TAT6 608 aa16.16■□□□□ 0.18
POLR2J3-217ENST00000513438 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
POLR2J3-217ENST00000513438 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
POLR2J3-217ENST00000513438 PFASO15067 1338 aa16.16■□□□□ 0.18
POLR2J3-217ENST00000513438 CHGBP05060 677 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 COL6A1P12109 1028 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 BMP8BP34820 402 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 KIAA1755Q5JYT7 1200 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 TMEM179Q6ZVK1 233 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 SIAH1Q8IUQ4 282 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 HAUS7Q99871 368 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
POLR2J3-217ENST00000513438 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 USP17L21D6R901 530 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 HOXC6P09630 235 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 AKR1B1P15121 316 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 CNGA1P29973 690 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 CDK8P49336 464 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 GRB14Q14449 540 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 C12orf60Q5U649 245 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
POLR2J3-217ENST00000513438 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 DSG3P32926 999 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 CYP2C19P33261 490 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 DPP9Q86TI2 863 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 CLEC10AQ8IUN9 316 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 DEFB123Q8N688 67 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 TMX2Q9Y320 296 aa16.13■□□□□ 0.17
POLR2J3-217ENST00000513438 STRNO43815 780 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 SPATC1LQ9H0A9 340 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 DDX20Q9UHI6 824 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 COL6A3P12111 3177 aa16.12■□□□□ 0.17
POLR2J3-217ENST00000513438 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 FLOT1O75955 427 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 IGHA2P01877 340 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 ERCC3P19447 782 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 ADORA2AP29274 412 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 ICA1Q05084 483 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 PLS1Q14651 629 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 TRPV1Q8NER1 839 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 LPAR1Q92633 364 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 SENP6Q9GZR1 1112 aaPredicted RBP16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 VCPKMTQ9H867 229 aa16.11■□□□□ 0.17
POLR2J3-217ENST00000513438 RLFQ13129 1914 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 MSCO60682 206 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 COBLO75128 1261 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 C16orf86Q6ZW13 317 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 Q7L0L9 218 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 TDHQ8IZJ6 230 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 ATG4CQ96DT6 458 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
POLR2J3-217ENST00000513438 CYBAP13498 195 aa16.09■□□□□ 0.17
POLR2J3-217ENST00000513438 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-217ENST00000513438 OLFML2BQ68BL8 750 aa16.09■□□□□ 0.17
POLR2J3-217ENST00000513438 GPR153Q6NV75 609 aa16.09■□□□□ 0.17
POLR2J3-217ENST00000513438 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
POLR2J3-217ENST00000513438 MROH8Q9H579 483 aa16.09■□□□□ 0.17
POLR2J3-217ENST00000513438 MYH8P13535 1937 aa16.09■□□□□ 0.17
POLR2J3-217ENST00000513438 LAMA3Q16787 3333 aa16.08■□□□□ 0.17
POLR2J3-217ENST00000513438 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-217ENST00000513438 LRIT3Q3SXY7 679 aa16.08■□□□□ 0.16
POLR2J3-217ENST00000513438 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
POLR2J3-217ENST00000513438 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
POLR2J3-217ENST00000513438 SLC5A4Q9NY91 659 aa16.08■□□□□ 0.16
POLR2J3-217ENST00000513438 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 TMEM132BQ14DG7 1078 aa16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 PRAMEF19Q5SWL8 479 aa16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 GJC2Q5T442 439 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 STRBPQ96SI9 672 aaKnown RBP16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
POLR2J3-217ENST00000513438 MYH7P12883 1935 aa16.06■□□□□ 0.16
POLR2J3-217ENST00000513438 FRMPD3Q5JV73 1810 aa16.06■□□□□ 0.16
POLR2J3-217ENST00000513438 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms