RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
HTT-211ENST00000513326 HSH2DQ96JZ2 352 aa6.36□□□□□ -1.39
HTT-211ENST00000513326 GAS2L1Q99501 681 aaPredicted RBP6.36□□□□□ -1.39
HTT-211ENST00000513326 UTP14AQ9BVJ6 771 aaKnown RBP6.36□□□□□ -1.39
HTT-211ENST00000513326 MXD3Q9BW11 206 aa6.36□□□□□ -1.39
HTT-211ENST00000513326 GPAMQ9HCL2 828 aa6.36□□□□□ -1.39
HTT-211ENST00000513326 DMGDHQ9UI17 866 aaKnown RBP6.36□□□□□ -1.39
HTT-211ENST00000513326 A0A0C4DFX4 3053 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 ZSWIM8A7E2V4 1837 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 ZNF646O15015 1829 aaPredicted RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 WTIPA6NIX2 430 aaPredicted RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 SOX1O00570 391 aaPredicted RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 BBOX1O75936 387 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 RPLP1P05386 114 aaKnown RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 ZNF280AP59817 542 aaPredicted RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 DNM1Q05193 864 aaKnown RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 PRKG1Q13976 671 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 LBRQ14739 615 aaKnown RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 NBPF9Q3BBW0 867 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 TMC7Q7Z402 723 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 BTLAQ7Z6A9 289 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 NLRP10Q86W26 655 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 NLRP8Q86W28 1048 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 SLC17A8Q8NDX2 589 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 CD99L2Q8TCZ2 262 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 EDEM1Q92611 657 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 ARMC5Q96C12 935 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 TRIM47Q96LD4 638 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 DMRTB1Q96MA1 342 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 RUBCNLQ9H714 662 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 POLIQ9UNA4 740 aa6.35□□□□□ -1.39
HTT-211ENST00000513326 NSFL1CQ9UNZ2 370 aaKnown RBP6.35□□□□□ -1.39
HTT-211ENST00000513326 IGF2BP3O00425 579 aaKnown RBP eCLIP6.34□□□□□ -1.39
HTT-211ENST00000513326 OPLAHO14841 1288 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 PDGFAP04085 211 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
HTT-211ENST00000513326 RPS12P25398 132 aaKnown RBP6.34□□□□□ -1.39
HTT-211ENST00000513326 IDH3AP50213 366 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 ARSDP51689 593 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 PTSQ03393 145 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 COL19A1Q14993 1142 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 EFHC2Q5JST6 749 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 DDX46Q7L014 1031 aaKnown RBP6.34□□□□□ -1.39
HTT-211ENST00000513326 PPP1R42Q7Z4L9 355 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 NPAS4Q8IUM7 802 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 GJD3Q8N144 294 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 TBC1D16Q8TBP0 767 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 GPR152Q8TDT2 470 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 PIK3R5Q8WYR1 880 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 GMLQ99445 158 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 CFHR5Q9BXR6 569 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 TMX4Q9H1E5 349 aaPredicted RBP6.34□□□□□ -1.39
HTT-211ENST00000513326 PTPN22Q9Y2R2 807 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 SSC5DA1L4H1 1573 aa6.34□□□□□ -1.39
HTT-211ENST00000513326 LAMA3Q16787 3333 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 RBM47A0AV96 593 aaKnown RBP6.33□□□□□ -1.4
HTT-211ENST00000513326 SLC35F4A4IF30 521 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 SOBPA7XYQ1 873 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 INPP5BP32019 993 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 FKBP1BP68106 108 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 EHHADHQ08426 723 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 TAF7Q15545 349 aaPredicted RBP6.33□□□□□ -1.4
HTT-211ENST00000513326 PARP10Q53GL7 1025 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 SAMD5Q5TGI4 173 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 TTC16Q8NEE8 873 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 ZNF333Q96JL9 665 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 CLMNQ96JQ2 1002 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 FAM129BQ96TA1 746 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 MYOZ2Q9NPC6 264 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 PSME4Q14997 1843 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 DLG5Q8TDM6 1919 aa6.33□□□□□ -1.4
HTT-211ENST00000513326 AOX1Q06278 1338 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 H7C1W4 665 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 TREHO43280 583 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 SASH1O94885 1247 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 EPB42P16452 691 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 CRHR2Q13324 411 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 FIGNL1Q6PIW4 674 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 RIPOR1Q6ZS17 1223 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 RTF1Q92541 710 aaKnown RBP6.32□□□□□ -1.4
HTT-211ENST00000513326 SHISA4Q96DD7 197 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 CEP63Q96MT8 703 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 PRO3102Q9H379 93 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 GMPR2Q9P2T1 348 aaKnown RBP6.32□□□□□ -1.4
HTT-211ENST00000513326 TRMT112Q9UI30 125 aaKnown RBP6.32□□□□□ -1.4
HTT-211ENST00000513326 FNDC3AQ9Y2H6 1198 aaKnown RBP6.32□□□□□ -1.4
HTT-211ENST00000513326 PTCH2Q9Y6C5 1203 aa6.32□□□□□ -1.4
HTT-211ENST00000513326 SH3TC1Q8TE82 1336 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 UFL1O94874 794 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 U2AF1L5P0DN76 240 aaPredicted RBP6.31□□□□□ -1.4
HTT-211ENST00000513326 EIF2S2P20042 333 aaKnown RBP6.31□□□□□ -1.4
HTT-211ENST00000513326 U2AF1Q01081 240 aaKnown RBP eCLIP6.31□□□□□ -1.4
HTT-211ENST00000513326 PLCB3Q01970 1234 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 TYRO3Q06418 890 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 SREBF2Q12772 1141 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 AIMP1Q12904 312 aaKnown RBP6.31□□□□□ -1.4
HTT-211ENST00000513326 LDLRAD1Q5T700 205 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms