RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 HIP1O00291 1037 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 Q3C1V9 767 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 SLC9C1Q4G0N8 1177 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 SPICE1Q8N0Z3 855 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 GPRC5AQ8NFJ5 357 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 GTF3C2Q8WUA4 911 aaPredicted RBP21.11■□□□□ 0.97
DDR1-272ENST00000513243 INCENPQ9NQS7 918 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 ANAPC4Q9UJX5 808 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 TACC3Q9Y6A5 838 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 GREB1LQ9C091 1923 aaPredicted RBP21.11■□□□□ 0.97
DDR1-272ENST00000513243 MGAMO43451 1857 aa21.11■□□□□ 0.97
DDR1-272ENST00000513243 RAET1EQ8TD07 263 aa21.1■□□□□ 0.97
DDR1-272ENST00000513243 PAGR1Q9BTK6 254 aa21.1■□□□□ 0.97
DDR1-272ENST00000513243 NYAP2Q9P242 653 aa21.1■□□□□ 0.97
DDR1-272ENST00000513243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.1■□□□□ 0.97
DDR1-272ENST00000513243 CNMDO75829 334 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 FLT3LGP49771 235 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 RGS19P49795 217 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 MFAP1P55081 439 aaKnown RBP21.09■□□□□ 0.97
DDR1-272ENST00000513243 ERVK-9P63128 1117 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 ERVK-24P63145 666 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 TFAP4Q01664 338 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 COG2Q14746 738 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 FAM47AQ5JRC9 791 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 LBX2Q6XYB7 198 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 NEDD1Q8NHV4 660 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 SH3TC2Q8TF17 1288 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 COA7Q96BR5 231 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 ZNF333Q96JL9 665 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 TANGO6Q9C0B7 1094 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 RABGAP1Q9Y3P9 1069 aa21.09■□□□□ 0.97
DDR1-272ENST00000513243 SPDYE16A6NNV3 312 aaPredicted RBP21.08■□□□□ 0.97
DDR1-272ENST00000513243 TSPY3P0CV98 308 aa21.08■□□□□ 0.97
DDR1-272ENST00000513243 TSPY8P0CW00 308 aa21.08■□□□□ 0.97
DDR1-272ENST00000513243 NBPF11Q86T75 865 aa21.08■□□□□ 0.97
DDR1-272ENST00000513243 CEP95Q96GE4 821 aa21.08■□□□□ 0.97
DDR1-272ENST00000513243 GOPCQ9HD26 462 aa21.08■□□□□ 0.97
DDR1-272ENST00000513243 MTMR4Q9NYA4 1195 aa21.08■□□□□ 0.97
DDR1-272ENST00000513243 ZMYM6O95789 1325 aa21.07■□□□□ 0.96
DDR1-272ENST00000513243 WDR46O15213 610 aaKnown RBP21.07■□□□□ 0.96
DDR1-272ENST00000513243 CENPQQ7L2Z9 268 aaPredicted RBP21.07■□□□□ 0.96
DDR1-272ENST00000513243 HOXC10Q9NYD6 342 aa21.07■□□□□ 0.96
DDR1-272ENST00000513243 BTBD7Q9P203 1132 aa21.07■□□□□ 0.96
DDR1-272ENST00000513243 CLIP2Q9UDT6 1046 aa21.07■□□□□ 0.96
DDR1-272ENST00000513243 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
DDR1-272ENST00000513243 RAD21O60216 631 aa21.06■□□□□ 0.96
DDR1-272ENST00000513243 FGRP09769 529 aa21.06■□□□□ 0.96
DDR1-272ENST00000513243 GRK4P32298 578 aa21.06■□□□□ 0.96
DDR1-272ENST00000513243 MKL1Q969V6 931 aa21.06■□□□□ 0.96
DDR1-272ENST00000513243 PORCNQ9H237 461 aa21.06■□□□□ 0.96
DDR1-272ENST00000513243 IL25Q9H293 177 aa21.06■□□□□ 0.96
DDR1-272ENST00000513243 GJD2Q9UKL4 321 aa21.06■□□□□ 0.96
DDR1-272ENST00000513243 F5H6K3 240 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 ORC4O43929 436 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 FLOT1O75955 427 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 TTLL1O95922 423 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 DSG3P32926 999 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 HAND2P61296 217 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 KLRC3Q07444 240 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 IRF5Q13568 498 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 NBPF3Q9H094 633 aa21.05■□□□□ 0.96
DDR1-272ENST00000513243 DOCK3Q8IZD9 2030 aa21.04■□□□□ 0.96
DDR1-272ENST00000513243 MYCP01106 439 aaPredicted RBP21.04■□□□□ 0.96
DDR1-272ENST00000513243 MAPK4P31152 587 aa21.04■□□□□ 0.96
DDR1-272ENST00000513243 FAM83BQ5T0W9 1011 aa21.04■□□□□ 0.96
DDR1-272ENST00000513243 IL17RBQ9NRM6 502 aa21.04■□□□□ 0.96
DDR1-272ENST00000513243 RLFQ13129 1914 aa21.04■□□□□ 0.96
DDR1-272ENST00000513243 POTEFA5A3E0 1075 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 TSPY2A6NKD2 308 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 ADCY3O60266 1144 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 RANBP6O60518 1105 aaKnown RBP21.03■□□□□ 0.96
DDR1-272ENST00000513243 NDUFB10O96000 172 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 CHMLP26374 656 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 CCNA1P78396 465 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 SKAP1Q86WV1 359 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 CCAR1Q8IX12 1150 aaKnown RBP21.03■□□□□ 0.96
DDR1-272ENST00000513243 SLAIN1Q8ND83 568 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 ATG4CQ96DT6 458 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 NUP88Q99567 741 aaPredicted RBP21.03■□□□□ 0.96
DDR1-272ENST00000513243 DSCC1Q9BVC3 393 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 FBXO28Q9NVF7 368 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 SYNPO2Q9UMS6 1093 aa21.03■□□□□ 0.96
DDR1-272ENST00000513243 NMT2O60551 498 aa21.02■□□□□ 0.96
DDR1-272ENST00000513243 ELNP15502 786 aa21.02■□□□□ 0.96
DDR1-272ENST00000513243 SAMD1Q6SPF0 538 aaPredicted RBP21.02■□□□□ 0.96
DDR1-272ENST00000513243 GPR142Q7Z601 462 aa21.02■□□□□ 0.96
DDR1-272ENST00000513243 TBC1D10CQ8IV04 446 aa21.02■□□□□ 0.96
DDR1-272ENST00000513243 LRRC47Q8N1G4 583 aaKnown RBP21.02■□□□□ 0.96
DDR1-272ENST00000513243 PXYLP1Q8TE99 480 aa21.02■□□□□ 0.96
DDR1-272ENST00000513243 TOMM22Q9NS69 142 aa21.02■□□□□ 0.96
DDR1-272ENST00000513243 CENPFP49454 3210 aa21.01■□□□□ 0.95
DDR1-272ENST00000513243 MTFR1Q15390 333 aa21.01■□□□□ 0.95
DDR1-272ENST00000513243 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
DDR1-272ENST00000513243 AKNAD1Q5T1N1 836 aa21.01■□□□□ 0.95
DDR1-272ENST00000513243 PLEKHH3Q7Z736 793 aa21.01■□□□□ 0.95
DDR1-272ENST00000513243 MB21D1Q8N884 522 aa21.01■□□□□ 0.95
DDR1-272ENST00000513243 STAG1Q8WVM7 1258 aa21.01■□□□□ 0.95
DDR1-272ENST00000513243 BIN2Q9UBW5 565 aaPredicted RBP21.01■□□□□ 0.95
DDR1-272ENST00000513243 ADAMTS5Q9UNA0 930 aa21.01■□□□□ 0.95
DDR1-272ENST00000513243 ZNF213O14771 459 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms