RNA–Protein interactions for RNA: ENST00000512966.1

SH3TC1-222, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-222	ENST00000512966	STX6	O43752	255 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SMARCA1	P28370	1054 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SHROOM1	Q2M3G4	852 aa	Predicted RBP	19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	KRT26	Q7Z3Y9	468 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	NBPF11	Q86T75	865 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	CLEC10A	Q8IUN9	316 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	TRIM22	Q8IYM9	498 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	WASF1	Q92558	559 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	RNF26	Q9BY78	433 aa	Predicted RBP	19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	MAD2L2	Q9UI95	211 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	MYH8	P13535	1937 aa		19.88	■□□□□ 0.77
SH3TC1-222	ENST00000512966	PARP1	P09874	1014 aa	Known RBP	19.87	■□□□□ 0.77
SH3TC1-222	ENST00000512966	VEGFA	P15692	232 aa	Predicted RBP	19.87	■□□□□ 0.77
SH3TC1-222	ENST00000512966	FUT2	Q10981	343 aa		19.87	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ARHGEF10L	Q9HCE6	1279 aa		19.87	■□□□□ 0.77
SH3TC1-222	ENST00000512966	PRPF3	O43395	683 aa	Known RBP	19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	PDHB	P11177	359 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ATP2B2	Q01814	1243 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	PKP1	Q13835	747 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ASPRV1	Q53RT3	343 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	EAPP	Q56P03	285 aa	Predicted RBP	19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	PRAMEF18	Q5VWM3	479 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	CDC37L1	Q7L3B6	337 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	USP48	Q86UV5	1035 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	LRRC47	Q8N1G4	583 aa	Known RBP	19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	GMCL1P1	Q8NEA9	526 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SLC26A6	Q9BXS9	759 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	RBM27	Q9P2N5	1060 aa	Known RBP	19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ZDHHC9	Q9Y397	364 aa		19.86	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ADM5	C9JUS6	153 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	DTNB	O60941	627 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	PLEKHA8P1	O95397	391 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	DEXI	O95424	95 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	AKAP17A	Q02040	695 aa	Known RBP	19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SRBD1	Q8N5C6	995 aa	Known RBP	19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	DCAF4	Q8WV16	495 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	PHKB	Q93100	1093 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	KLRG1	Q96E93	195 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SH2D4A	Q9H788	454 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	MTMR6	Q9Y217	621 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	TMX2	Q9Y320	296 aa		19.85	■□□□□ 0.77
SH3TC1-222	ENST00000512966	USP17L5	A8MUK1	530 aa		19.84	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ZSCAN22	P10073	491 aa	Predicted RBP	19.84	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ZNF543	Q08ER8	600 aa		19.84	■□□□□ 0.77
SH3TC1-222	ENST00000512966	NOL9	Q5SY16	702 aa	Known RBP	19.84	■□□□□ 0.77
SH3TC1-222	ENST00000512966	GPATCH4	Q5T3I0	446 aa	Known RBP	19.84	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SCYL3	Q8IZE3	742 aa		19.84	■□□□□ 0.77
SH3TC1-222	ENST00000512966	STAG2	Q8N3U4	1231 aa		19.84	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SSC5D	A1L4H1	1573 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	CNTNAP5	Q8WYK1	1306 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966		A0A1W2PRG0	241 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	KLRF2	D3W0D1	207 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	USP2	O75604	605 aa	Predicted RBP	19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	NF2	P35240	595 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SLFN13	Q68D06	897 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	USP17L2	Q6R6M4	530 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	CMTR1	Q8N1G2	835 aa	Known RBP	19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	GMCL1	Q96IK5	515 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	WRNIP1	Q96S55	665 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	ALG1	Q9BT22	464 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	SPZ1	Q9BXG8	430 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966	RRAGC	Q9HB90	399 aa		19.83	■□□□□ 0.77
SH3TC1-222	ENST00000512966		F5H6K3	240 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966		H3BQV1	296 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	PPP1R12B	O60237	982 aa	Predicted RBP	19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	PPFIA3	O75145	1194 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	INPP5B	P32019	993 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	KLRC3	Q07444	240 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	IFFO2	Q5TF58	517 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	CCDC82	Q8N4S0	544 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	19.82	■□□□□ 0.76	2e-6	■■□□□ 12
SH3TC1-222	ENST00000512966	TNPO1	Q92973	898 aa	Known RBP	19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	CDCA5	Q96FF9	252 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	C8orf76	Q96K31	380 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	GOPC	Q9HD26	462 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	MTMR7	Q9Y216	660 aa		19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966		V9GY48	417 aa	Predicted RBP	19.82	■□□□□ 0.76
SH3TC1-222	ENST00000512966	VPS37C	A5D8V6	355 aa	Predicted RBP	19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	CLEC17A	Q6ZS10	378 aa		19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	FBXO18	Q8NFZ0	1043 aa		19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	ACER1	Q8TDN7	264 aa		19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	WDR18	Q9BV38	432 aa		19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	RIOX1	Q9H6W3	641 aa		19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	PICK1	Q9NRD5	415 aa		19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	CLEC11A	Q9Y240	323 aa		19.81	■□□□□ 0.76
SH3TC1-222	ENST00000512966	NDUFB10	O96000	172 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	F13A1	P00488	732 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	GOLGA8H	P0CJ92	632 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	ECE1	P42892	770 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	SLC1A4	P43007	532 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	MAP3K9	P80192	1104 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	PKN1	Q16512	942 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	LDHD	Q86WU2	507 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	GLIS2	Q9BZE0	524 aa	Predicted RBP	19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	VCPKMT	Q9H867	229 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	AS3MT	Q9HBK9	375 aa		19.8	■□□□□ 0.76
SH3TC1-222	ENST00000512966	CYTH3	O43739	400 aa		19.79	■□□□□ 0.76
SH3TC1-222	ENST00000512966	XBP1	P17861	261 aa		19.79	■□□□□ 0.76
SH3TC1-222	ENST00000512966	PTPRA	P18433	802 aa		19.79	■□□□□ 0.76
SH3TC1-222	ENST00000512966	IREB2	P48200	963 aa	Known RBP	19.79	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms