RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 C6orf15Q6UXA7 325 aaPredicted RBP6.17□□□□□ -1.42
HTT-210ENST00000512909 NOP9Q86U38 636 aaKnown RBP6.17□□□□□ -1.42
HTT-210ENST00000512909 MKL1Q969V6 931 aa6.17□□□□□ -1.42
HTT-210ENST00000512909 IPO9Q96P70 1041 aaKnown RBP6.17□□□□□ -1.42
HTT-210ENST00000512909 DEPDC7Q96QD5 511 aa6.17□□□□□ -1.42
HTT-210ENST00000512909 ASPNQ9BXN1 380 aa6.17□□□□□ -1.42
HTT-210ENST00000512909 TNKS2Q9H2K2 1166 aa6.17□□□□□ -1.42
HTT-210ENST00000512909 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
HTT-210ENST00000512909 SUGT1Q9Y2Z0 365 aa6.17□□□□□ -1.42
HTT-210ENST00000512909 IQCA1LA6NCM1 817 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 NOP56O00567 594 aaKnown RBP6.16□□□□□ -1.42
HTT-210ENST00000512909 MSTNO14793 375 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 KLF4O43474 513 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 DNAJA2O60884 412 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
HTT-210ENST00000512909 PLA2G4EQ3MJ16 856 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 SV2CQ496J9 727 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 MTERF2Q49AM1 385 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
HTT-210ENST00000512909 RNF43Q68DV7 783 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 OGFOD3Q6PK18 319 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 ZAR1Q86SH2 424 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 ZNF512BQ96KM6 892 aaPredicted RBP6.16□□□□□ -1.42
HTT-210ENST00000512909 KREMEN1Q96MU8 473 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 APBA2Q99767 749 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 DBNDD2Q9BQY9 259 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 PCDHB10Q9UN67 800 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 LEMD3Q9Y2U8 911 aa6.16□□□□□ -1.42
HTT-210ENST00000512909 RSF1Q96T23 1441 aaPredicted RBP6.16□□□□□ -1.42
HTT-210ENST00000512909 WIZO95785 1651 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 SSU72P8A0A1W2PR75 194 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 WDR64B1ANS9 1081 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 DYNC1LI2O43237 492 aaPredicted RBP6.15□□□□□ -1.42
HTT-210ENST00000512909 PPM1BO75688 479 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 GPAT2Q6NUI2 795 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 CRACR2BQ8N4Y2 399 aaPredicted RBP6.15□□□□□ -1.42
HTT-210ENST00000512909 RNF141Q8WVD5 230 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 DSCC1Q9BVC3 393 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 LRRC4CQ9HCJ2 640 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 TPSG1Q9NRR2 321 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 CDK11AQ9UQ88 783 aaPredicted RBP6.15□□□□□ -1.42
HTT-210ENST00000512909 PCDHB12Q9Y5F1 795 aa6.15□□□□□ -1.42
HTT-210ENST00000512909 HMGXB3Q12766 1538 aa6.15□□□□□ -1.43
HTT-210ENST00000512909 PDPK1O15530 556 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 UBOX5O94941 541 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 SLITRK5O94991 958 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 GJB6O95452 261 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 IGLV1-40P01703 118 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 APPP05067 770 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 ACRP10323 421 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 ITGA4P13612 1032 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 KIR3DL1P43629 444 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 NFIAQ12857 509 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 ZYXQ15942 572 aaKnown RBP6.14□□□□□ -1.43
HTT-210ENST00000512909 LRP10Q7Z4F1 713 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 SYTL4Q96C24 671 aaPredicted RBP6.14□□□□□ -1.43
HTT-210ENST00000512909 CCDC113Q9H0I3 377 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 C1GALT1Q9NS00 363 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 ZNF214Q9UL59 606 aaPredicted RBP6.14□□□□□ -1.43
HTT-210ENST00000512909 CADPSQ9ULU8 1353 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 PDS5BQ9NTI5 1447 aa6.14□□□□□ -1.43
HTT-210ENST00000512909 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 LEFTY1O75610 366 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 H2AFB2P0C5Z0 115 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 FSTP19883 344 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 NBPF9Q3BBW0 867 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 TAF7LQ5H9L4 462 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 CWF19L1Q69YN2 538 aaKnown RBP6.13□□□□□ -1.43
HTT-210ENST00000512909 TMEM192Q8IY95 271 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 CELF2-AS1Q8N7Q2 184 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 SSBP4Q9BWG4 385 aaPredicted RBP6.13□□□□□ -1.43
HTT-210ENST00000512909 EPN3Q9H201 632 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 TRIT1Q9H3H1 467 aaKnown RBP6.13□□□□□ -1.43
HTT-210ENST00000512909 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
HTT-210ENST00000512909 FAM170BA6NMN3 283 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 B2RBV5 119 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 CYP26A1O43174 497 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 ITIH2P19823 946 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 GRIK1P39086 918 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 ZNF143P52747 638 aaPredicted RBP6.12□□□□□ -1.43
HTT-210ENST00000512909 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
HTT-210ENST00000512909 CPSF6Q16630 551 aaKnown RBP eCLIP6.12□□□□□ -1.43
HTT-210ENST00000512909 POMZP3Q6PJE2 187 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 ZNF765Q7L2R6 523 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 SLC51AQ86UW1 340 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 C7orf61Q8IZ16 206 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 LRRC47Q8N1G4 583 aaKnown RBP6.12□□□□□ -1.43
HTT-210ENST00000512909 MFSD4AQ8N468 514 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 DNAJB8Q8NHS0 232 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 RIN3Q8TB24 985 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 SHKBP1Q8TBC3 707 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 LTBP3Q9NS15 1303 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 GPATCH2Q9NW75 528 aa6.12□□□□□ -1.43
HTT-210ENST00000512909 SUSD5O60279 629 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 IGHA1P01876 353 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
HTT-210ENST00000512909 RASGRF1Q13972 1273 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 SEZ6L2Q6UXD5 910 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms