RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 CAPN2P17655 700 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 CASP14P31944 242 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 FXR1P51114 621 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNX25-205ENST00000512853 SPAG1Q07617 926 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
SNX25-205ENST00000512853 HDXQ7Z353 690 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 SLC35F6Q8N357 371 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 IQUBQ8NA54 791 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 HELBQ8NG08 1087 aaPredicted RBP13.11□□□□□ -0.31
SNX25-205ENST00000512853 PNKPQ96T60 521 aa13.11□□□□□ -0.31
SNX25-205ENST00000512853 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
SNX25-205ENST00000512853 PUF60Q9UHX1 559 aaKnown RBP13.11□□□□□ -0.31
SNX25-205ENST00000512853 LRRC10BA6NIK2 292 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 TUBBP07437 444 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 ERVK-24P63145 666 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
SNX25-205ENST00000512853 AKAP17AQ02040 695 aaKnown RBP13.1□□□□□ -0.31
SNX25-205ENST00000512853 RAD51AP2Q09MP3 1159 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 KRT31Q15323 416 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 E2F4Q16254 413 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 KIF4BQ2VIQ3 1234 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 ESR2Q92731 530 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 PYM1Q9BRP8 204 aaKnown RBP13.1□□□□□ -0.31
SNX25-205ENST00000512853 RBM28Q9NW13 759 aaKnown RBP13.1□□□□□ -0.31
SNX25-205ENST00000512853 VPS54Q9P1Q0 977 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 RWDD2AQ9UIY3 292 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 L1RE1Q9UN81 338 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 BCL9O00512 1426 aa13.1□□□□□ -0.31
SNX25-205ENST00000512853 WNT7AO00755 349 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 CASP1P29466 404 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 NPY5RQ15761 445 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 ACRBPQ8NEB7 543 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 GOLGA5Q8TBA6 731 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 CPLX3Q8WVH0 158 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 ZSWIM4Q9H7M6 989 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 ABHD10Q9NUJ1 306 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 LAMB1P07942 1786 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
SNX25-205ENST00000512853 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
SNX25-205ENST00000512853 EIF3JO75822 258 aaKnown RBP13.09□□□□□ -0.31
SNX25-205ENST00000512853 COPB1P53618 953 aaKnown RBP13.09□□□□□ -0.31
SNX25-205ENST00000512853 AMPD2Q01433 879 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 ZSCAN26Q16670 478 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 TTC38Q5R3I4 469 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
SNX25-205ENST00000512853 SLC4A9Q96Q91 983 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 BRMS1Q9HCU9 246 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
SNX25-205ENST00000512853 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 CTAGE15A4D2H0 777 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 ZBTB22O15209 634 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 CTAGE8P0CG41 777 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 CTAGE6Q86UF2 777 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 CTAGE4Q8IX94 777 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
SNX25-205ENST00000512853 CDC5LQ99459 802 aaKnown RBP13.08□□□□□ -0.32
SNX25-205ENST00000512853 PDE11AQ9HCR9 933 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 CNTNAP5Q8WYK1 1306 aa13.08□□□□□ -0.32
SNX25-205ENST00000512853 DDAH1O94760 285 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 TMTC3Q6ZXV5 915 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 ZSCAN10Q96SZ4 725 aaPredicted RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 ABCB6Q9NP58 842 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 BAZ2AQ9UIF9 1905 aaKnown RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 N4BP3O15049 544 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 RPS6KA5O75582 802 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 PRDM1O75626 825 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 PLEKHA8P1O95397 391 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 CALM1P0DP23 149 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 CALM2P0DP24 149 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 CALM3P0DP25 149 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 CCT6AP40227 531 aaKnown RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 VSNL1P62760 191 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 PAK1Q13153 545 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 MIGA1Q8NAN2 632 aa13.07□□□□□ -0.32
SNX25-205ENST00000512853 FEZ2Q9UHY8 353 aaPredicted RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 IQSEC3Q9UPP2 1182 aaPredicted RBP13.07□□□□□ -0.32
SNX25-205ENST00000512853 SNAP23O00161 211 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 FGRP09769 529 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 PCP11498 1178 aaKnown RBP13.06□□□□□ -0.32
SNX25-205ENST00000512853 CYP7A1P22680 504 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
SNX25-205ENST00000512853 ACTN2P35609 894 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 LMAN1P49257 510 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms