RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 PTPREP23469 700 aa17.71■□□□□ 0.43
CCHCR1-229ENST00000512418 COG2Q14746 738 aa17.71■□□□□ 0.43
CCHCR1-229ENST00000512418 C12orf60Q5U649 245 aa17.71■□□□□ 0.43
CCHCR1-229ENST00000512418 LPAR1Q92633 364 aa17.71■□□□□ 0.43
CCHCR1-229ENST00000512418 TANGO6Q9C0B7 1094 aa17.71■□□□□ 0.43
CCHCR1-229ENST00000512418 ARHGEF10LQ9HCE6 1279 aa17.71■□□□□ 0.43
CCHCR1-229ENST00000512418 A0A0G2JMZ2 1700 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 SMARCA5O60264 1052 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 CHGBP05060 677 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 AKR1B1P15121 316 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 ICA1Q05084 483 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 GRB14Q14449 540 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 CCDC17Q96LX7 622 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 SH2D4AQ9H788 454 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 ECHDC1Q9NTX5 307 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 SLC4A4Q9Y6R1 1079 aa17.7■□□□□ 0.42
CCHCR1-229ENST00000512418 A0A1W2PPC1 479 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 USP17L12C9JPN9 530 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 USP17L21D6R901 530 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 HOXC6P09630 235 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 CCND3P30281 292 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 MFSD14CQ5VZR4 134 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 LHX8Q68G74 356 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 C16orf86Q6ZW13 317 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 C7orf61Q8IZ16 206 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 TMX2Q9Y320 296 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 ZNF236Q9UL36 1845 aa17.69■□□□□ 0.42
CCHCR1-229ENST00000512418 RLFQ13129 1914 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 CYP2D7A0A087X1C5 515 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 CDK8P49336 464 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 CLEC10AQ8IUN9 316 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 SIAH1Q8IUQ4 282 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 MB21D1Q8N884 522 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 GPATCH3Q96I76 525 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 MOV10L1Q9BXT6 1211 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 SPATC1LQ9H0A9 340 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 PUS7LQ9H0K6 701 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 VCPKMTQ9H867 229 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 FLRT1Q9NZU1 646 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 PFASO15067 1338 aa17.68■□□□□ 0.42
CCHCR1-229ENST00000512418 LAMA3Q16787 3333 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 SPICE1Q8N0Z3 855 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 SHCBP1Q8NEM2 672 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 FRMPD3Q5JV73 1810 aa17.67■□□□□ 0.42
CCHCR1-229ENST00000512418 WDR46O15213 610 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 STRNO43815 780 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 FLOT1O75955 427 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 COL6A1P12109 1028 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 DSG3P32926 999 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 KBTBD3Q8NAB2 608 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 NPLOC4Q8TAT6 608 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 KANSL2Q9H9L4 492 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 STAP2Q9UGK3 403 aa17.66■□□□□ 0.42
CCHCR1-229ENST00000512418 MSCO60682 206 aa17.65■□□□□ 0.42
CCHCR1-229ENST00000512418 ERCC3P19447 782 aa17.65■□□□□ 0.42
CCHCR1-229ENST00000512418 ADORA2AP29274 412 aa17.65■□□□□ 0.42
CCHCR1-229ENST00000512418 DPP9Q86TI2 863 aa17.65■□□□□ 0.42
CCHCR1-229ENST00000512418 STRBPQ96SI9 672 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-229ENST00000512418 PARP14Q460N5 1801 aa17.65■□□□□ 0.42
CCHCR1-229ENST00000512418 IGHA2P01877 340 aa17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 EEF2P13639 858 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 GIMAP6Q6P9H5 292 aa17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 APPBP2Q92624 585 aa17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 ATG4CQ96DT6 458 aa17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 GDF15Q99988 308 aa17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 MROH8Q9H579 483 aa17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 DDX20Q9UHI6 824 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 ZMYND8Q9ULU4 1186 aaPredicted RBP17.64■□□□□ 0.41
CCHCR1-229ENST00000512418 ZFYP08048 801 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 CYP2C19P33261 490 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 BMP8BP34820 402 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 PLS1Q14651 629 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 SBK1Q52WX2 424 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 OLFML2BQ68BL8 750 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 ABRAQ8N0Z2 381 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 GOPCQ9HD26 462 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 SLC5A4Q9NY91 659 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
CCHCR1-229ENST00000512418 GREB1LQ9C091 1923 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-229ENST00000512418 GSG1L2A8MUP6 293 aa17.62■□□□□ 0.41
CCHCR1-229ENST00000512418 CYBAP13498 195 aa17.62■□□□□ 0.41
CCHCR1-229ENST00000512418 CNGA1P29973 690 aa17.62■□□□□ 0.41
CCHCR1-229ENST00000512418 NCAPG2Q86XI2 1143 aa17.62■□□□□ 0.41
CCHCR1-229ENST00000512418 OSBP2Q969R2 916 aa17.62■□□□□ 0.41
CCHCR1-229ENST00000512418 RNF113AO15541 343 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 SLC25A27O95847 323 aa17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 SYN1P17600 705 aa17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 GNAT2P19087 354 aa17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 TRPV1Q8NER1 839 aa17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms