RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 PICK1Q9NRD5 415 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 PCDH10Q9P2E7 1040 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 AFG3L2Q9Y4W6 797 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 MPHOSPH10O00566 681 aaKnown RBP23.08■■□□□ 1.29
SMAD1-211ENST00000512019 RANBP6O60518 1105 aaKnown RBP23.08■■□□□ 1.29
SMAD1-211ENST00000512019 GDF11O95390 407 aa23.08■■□□□ 1.29
SMAD1-211ENST00000512019 ASNSP08243 561 aa23.08■■□□□ 1.29
SMAD1-211ENST00000512019 GADL1Q6ZQY3 521 aa23.08■■□□□ 1.29
SMAD1-211ENST00000512019 NCOA7Q8NI08 942 aa23.08■■□□□ 1.29
SMAD1-211ENST00000512019 PARK7Q99497 189 aaKnown RBP23.08■■□□□ 1.29
SMAD1-211ENST00000512019 INCENPQ9NQS7 918 aa23.08■■□□□ 1.29
SMAD1-211ENST00000512019 TACC3Q9Y6A5 838 aa23.08■■□□□ 1.29
SMAD1-211ENST00000512019 TAF6LQ9Y6J9 622 aa23.08■■□□□ 1.29
SMAD1-211ENST00000512019 MYPNQ86TC9 1320 aa23.08■■□□□ 1.28
SMAD1-211ENST00000512019 PLIN4Q96Q06 1357 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 TSPY2A6NKD2 308 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 TSPY3P0CV98 308 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 TSPY8P0CW00 308 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 RRP1BQ14684 758 aaKnown RBP23.07■■□□□ 1.28
SMAD1-211ENST00000512019 HABP4Q5JVS0 413 aaKnown RBP23.07■■□□□ 1.28
SMAD1-211ENST00000512019 STOX1Q6ZVD7 989 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 TMEM179Q6ZVK1 233 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 RASEFQ8IZ41 740 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 ZBTB21Q9ULJ3 1066 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 SNX14Q9Y5W7 946 aa23.07■■□□□ 1.28
SMAD1-211ENST00000512019 DOCK3Q8IZD9 2030 aa23.06■■□□□ 1.28
SMAD1-211ENST00000512019 B4E1Z4 1266 aa23.06■■□□□ 1.28
SMAD1-211ENST00000512019 GH2P01242 217 aa23.06■■□□□ 1.28
SMAD1-211ENST00000512019 AKR1B1P15121 316 aa23.06■■□□□ 1.28
SMAD1-211ENST00000512019 ANAPC15P60006 121 aa23.06■■□□□ 1.28
SMAD1-211ENST00000512019 SHISA4Q96DD7 197 aa23.06■■□□□ 1.28
SMAD1-211ENST00000512019 LOC285556D6RIA3 1793 aa23.06■■□□□ 1.28
SMAD1-211ENST00000512019 KDM4AO75164 1064 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 HOXD10P28358 340 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 GRK4P32298 578 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 TFAP4Q01664 338 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 PRKCZQ05513 592 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 FASTKD5Q7L8L6 764 aaKnown RBP23.05■■□□□ 1.28
SMAD1-211ENST00000512019 RAET1EQ8TD07 263 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 C22orf23Q9BZE7 217 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 GABRQQ9UN88 632 aa23.05■■□□□ 1.28
SMAD1-211ENST00000512019 TRIM75PA6NK02 468 aa23.04■■□□□ 1.28
SMAD1-211ENST00000512019 PSMA5P28066 241 aa23.04■■□□□ 1.28
SMAD1-211ENST00000512019 FAM47AQ5JRC9 791 aa23.04■■□□□ 1.28
SMAD1-211ENST00000512019 PPP4R3BQ5MIZ7 849 aa23.04■■□□□ 1.28
SMAD1-211ENST00000512019 NEDD1Q8NHV4 660 aa23.04■■□□□ 1.28
SMAD1-211ENST00000512019 HMGB1P09429 215 aaKnown RBP23.03■■□□□ 1.28
SMAD1-211ENST00000512019 RAB3GAP1Q15042 981 aa23.03■■□□□ 1.28
SMAD1-211ENST00000512019 IQCA1Q86XH1 822 aa23.03■■□□□ 1.28
SMAD1-211ENST00000512019 NEK1Q96PY6 1258 aa23.03■■□□□ 1.28
SMAD1-211ENST00000512019 TBC1D2Q9BYX2 928 aa23.03■■□□□ 1.28
SMAD1-211ENST00000512019 GREB1LQ9C091 1923 aaPredicted RBP23.03■■□□□ 1.28
SMAD1-211ENST00000512019 USP17L5A8MUK1 530 aa23.02■■□□□ 1.28
SMAD1-211ENST00000512019 FCGRTP55899 365 aa23.02■■□□□ 1.28
SMAD1-211ENST00000512019 SHROOM1Q2M3G4 852 aaPredicted RBP23.02■■□□□ 1.28
SMAD1-211ENST00000512019 MB21D2Q8IYB1 491 aaPredicted RBP23.02■■□□□ 1.28
SMAD1-211ENST00000512019 JAKMIP1Q96N16 626 aaKnown RBP23.02■■□□□ 1.28
SMAD1-211ENST00000512019 KANSL2Q9H9L4 492 aa23.02■■□□□ 1.28
SMAD1-211ENST00000512019 RBM25P49756 843 aaKnown RBP23.01■■□□□ 1.27
SMAD1-211ENST00000512019 JAG1P78504 1218 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 ICA1Q05084 483 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 SEPT2Q15019 361 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 ADCK5Q3MIX3 580 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 CCDC178Q5BJE1 867 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 UBAC1Q9BSL1 405 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 AS3MTQ9HBK9 375 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 TCP11L1Q9NUJ3 509 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 ZSWIM5Q9P217 1185 aa23.01■■□□□ 1.27
SMAD1-211ENST00000512019 CCL5P13501 91 aa23■■□□□ 1.27
SMAD1-211ENST00000512019 GUCY1A2P33402 732 aa23■■□□□ 1.27
SMAD1-211ENST00000512019 MCM5P33992 734 aa23■■□□□ 1.27
SMAD1-211ENST00000512019 SART3Q15020 963 aaKnown RBP23■■□□□ 1.27
SMAD1-211ENST00000512019 TREML2Q5T2D2 321 aa23■■□□□ 1.27
SMAD1-211ENST00000512019 IL17RAQ96F46 866 aa23■■□□□ 1.27
SMAD1-211ENST00000512019 GNL3Q9BVP2 549 aaKnown RBP eCLIP23■■□□□ 1.27
SMAD1-211ENST00000512019 TM6SF1Q9BZW5 370 aa23■■□□□ 1.27
SMAD1-211ENST00000512019 SLC45A1Q9Y2W3 748 aa23■■□□□ 1.27
SMAD1-211ENST00000512019 IGKV6D-41A0A0C4DH26 115 aa22.99■■□□□ 1.27
SMAD1-211ENST00000512019 CASTP20810 708 aaKnown RBP22.99■■□□□ 1.27
SMAD1-211ENST00000512019 BLOC1S2Q6QNY1 142 aa22.99■■□□□ 1.27
SMAD1-211ENST00000512019 CYB5R4Q7L1T6 521 aa22.99■■□□□ 1.27
SMAD1-211ENST00000512019 CEP95Q96GE4 821 aa22.99■■□□□ 1.27
SMAD1-211ENST00000512019 TBC1D32Q96NH3 1257 aa22.99■■□□□ 1.27
SMAD1-211ENST00000512019 BIN2Q9UBW5 565 aaPredicted RBP22.99■■□□□ 1.27
SMAD1-211ENST00000512019 WDR19Q8NEZ3 1342 aa22.99■■□□□ 1.27
SMAD1-211ENST00000512019 ERICH2A1L162 156 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 H0YGN5 161 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 DHX32Q7L7V1 743 aaKnown RBP22.98■■□□□ 1.27
SMAD1-211ENST00000512019 SMCR8Q8TEV9 937 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-211ENST00000512019 ZSCAN10Q96SZ4 725 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-211ENST00000512019 MTA3Q9BTC8 594 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 RNF208Q9H0X6 261 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 SH2D4AQ9H788 454 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 ARHGEF10LQ9HCE6 1279 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 MTMR4Q9NYA4 1195 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 AGTPBP1Q9UPW5 1226 aa22.98■■□□□ 1.27
SMAD1-211ENST00000512019 COLQQ9Y215 455 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-211ENST00000512019 PRC1O43663 620 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 TTLL1O95922 423 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 FLT3LGP49771 235 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms