RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 HSFX1Q9UBD0 423 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 RCOR1Q9UKL0 485 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 PCDHA6Q9UN73 950 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 L1RE1Q9UN81 338 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 MAPK8IP3Q9UPT6 1336 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 F8W031 263 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 CPA1P15085 419 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 U2AF2P26368 475 aaKnown RBP eCLIP2□□□□□ -2.097e-7■■■■□ 21.2
TRAPPC13-211ENST00000512009 TERF2Q15554 542 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 BEND6Q5SZJ8 279 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 VPS53Q5VIR6 699 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 TSHZ3Q63HK5 1081 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 C14orf37Q86TY3 774 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 SAPCD2Q86UD0 394 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 FAM136AQ96C01 138 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 MS4A4AQ96JQ5 239 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 BCAS3Q9H6U6 928 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 CYLDQ9NQC7 956 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 GJB4Q9NTQ9 266 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 ISY1Q9ULR0 285 aaKnown RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 CNPY2Q9Y2B0 182 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 PTPRQQ9UMZ3 2332 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 HMMRO75330 724 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 VIL1P09327 827 aaKnown RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 NASPP49321 788 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 KCNC4Q03721 635 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 TPRNQ4KMQ1 711 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 FBXO38Q6PIJ6 1188 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 USP49Q70CQ1 688 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 USP50Q70EL3 339 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 MSANTD4Q8NCY6 345 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 KIF18AQ8NI77 898 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2□□□□□ -2.092e-6■■■■■ 149.1
TRAPPC13-211ENST00000512009 ARHGEF4Q9NR80 690 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 CABP1Q9NZU7 370 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 MORF4L1Q9UBU8 362 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 KCNG1Q9UIX4 513 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 CEP192Q8TEP8 1941 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 KIAA0100Q14667 2235 aaKnown RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 GON4LQ3T8J9 2241 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 MYO3BQ8WXR4 1341 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 FER1L5A0AVI2 2057 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 BIN1O00499 593 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 CITO14578 2027 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 EPHB6O15197 1021 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 SYT1P21579 422 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 MGAT5Q09328 741 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 CDCA2Q69YH5 1023 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 LRSAM1Q6UWE0 723 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 C3orf67Q6ZVT6 689 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 GPC2Q8N158 579 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZNF512BQ96KM6 892 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 BPIFA3Q9BQP9 254 aa2□□□□□ -2.09
TRAPPC13-211ENST00000512009 EIF4ENIF1Q9NRA8 985 aaKnown RBP2□□□□□ -2.09
TRAPPC13-211ENST00000512009 GAKO14976 1311 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 GOLGA6L4A6NEF3 574 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 AXIN1O15169 862 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 NOL4O94818 638 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 BCRP11274 1271 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 UAP1Q16222 522 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 MIIPQ5JXC2 388 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 C1orf220Q5T0J3 134 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 SHC4Q6S5L8 630 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 IGDCC4Q8TDY8 1250 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZSCAN16Q9H4T2 348 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 FEZ2Q9UHY8 353 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 SPTBN2O15020 2390 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 CHD8Q9HCK8 2581 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ADSSP30520 456 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ABL2P42684 1182 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 CDK17Q00537 523 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 PLS1Q14651 629 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 LMO3Q8TAP4 145 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 RIN3Q8TB24 985 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 SHKBP1Q8TBC3 707 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZSCAN18Q8TBC5 510 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 NOC3LQ8WTT2 800 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 WDR24Q96S15 920 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 PNKPQ96T60 521 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 AAASQ9NRG9 546 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 HCN4Q9Y3Q4 1203 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 DNHD1Q96M86 4753 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ANKRD17O75179 2603 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ADAMTS9Q9P2N4 1935 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 DYNC2H1Q8NCM8 4307 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 LOC102724428A0A0B4J2F2 783 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 TRAK2O60296 914 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 DKK1O94907 266 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 IVDP26440 423 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ALDH1B1P30837 517 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 SIK1P57059 783 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 FGD1P98174 961 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 FOXK2Q01167 660 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 MEA1Q16626 185 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZNF423Q2M1K9 1284 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 SOGA3Q5TF21 947 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 CYHR1Q6ZMK1 362 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZFPM1Q8IX07 1006 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 NSUN7Q8NE18 718 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms