RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 USP14P54578 494 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 ERVK-9P63128 1117 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 ERVK-24P63145 666 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L24Q0WX57 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 KIAA1755Q5JYT7 1200 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 CATSPERGQ6ZRH7 1159 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 STRBPQ96SI9 672 aaKnown RBP11.9□□□□□ -0.5
COPS4-211ENST00000511891 PORCNQ9H237 461 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 RPAP3Q9H6T3 665 aaPredicted RBP11.9□□□□□ -0.5
COPS4-211ENST00000511891 SWAP70Q9UH65 585 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 GSG1L2A8MUP6 293 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 M0R2C6 588 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 GJB1P08034 283 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 CYP2B6P20813 491 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 TRIM32Q13049 653 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 TMEM179Q6ZVK1 233 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 SIAH1Q8IUQ4 282 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 STK11IPQ8N1F8 1099 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 PI4K2BQ8TCG2 481 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 APPBP2Q92624 585 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 DDRGK1Q96HY6 314 aa11.89□□□□□ -0.51
COPS4-211ENST00000511891 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 MX1P20591 662 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 GJA8P48165 433 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 ICA1Q05084 483 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 ANKRD45Q5TZF3 282 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 U2AF1L4Q8WU68 220 aaKnown RBP11.88□□□□□ -0.51
COPS4-211ENST00000511891 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
COPS4-211ENST00000511891 DEFB118Q96PH6 123 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 SEC62Q99442 399 aaKnown RBP11.88□□□□□ -0.51
COPS4-211ENST00000511891 EPB41L4AQ9HCS5 686 aaPredicted RBP11.88□□□□□ -0.51
COPS4-211ENST00000511891 BTBD7Q9P203 1132 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 PLXNB2O15031 1838 aa11.88□□□□□ -0.51
COPS4-211ENST00000511891 SPDYE16A6NNV3 312 aaPredicted RBP11.87□□□□□ -0.51
COPS4-211ENST00000511891 ERC2O15083 957 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 GPAA1O43292 621 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 GLRX3O76003 335 aaKnown RBP11.87□□□□□ -0.51
COPS4-211ENST00000511891 HMGCRP04035 888 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 ZFYP08048 801 aaPredicted RBP11.87□□□□□ -0.51
COPS4-211ENST00000511891 MAPK4P31152 587 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 GPR142Q7Z601 462 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 CCAR1Q8IX12 1150 aaKnown RBP11.87□□□□□ -0.51
COPS4-211ENST00000511891 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 TRIB2Q92519 343 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 CCDC17Q96LX7 622 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
COPS4-211ENST00000511891 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 MINDY4BA8MYZ0 360 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 SGPL1O95470 568 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
COPS4-211ENST00000511891 APPP05067 770 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
COPS4-211ENST00000511891 CCL14Q16627 93 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 MORN1Q5T089 497 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 WDR78Q5VTH9 848 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 PLEKHH3Q7Z736 793 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 UBE2Q1Q7Z7E8 422 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 USP6NLQ92738 828 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 ARHGEF10LQ9HCE6 1279 aa11.86□□□□□ -0.51
COPS4-211ENST00000511891 CWC22Q9HCG8 908 aaKnown RBP11.86□□□□□ -0.51
COPS4-211ENST00000511891 PAK6Q9NQU5 681 aaPredicted RBP11.86□□□□□ -0.51
COPS4-211ENST00000511891 ARPP21Q9UBL0 812 aaPredicted RBP11.86□□□□□ -0.51
COPS4-211ENST00000511891 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
COPS4-211ENST00000511891 MKI67P46013 3256 aaKnown RBP11.86□□□□□ -0.51
COPS4-211ENST00000511891 FARP2O94887 1054 aaPredicted RBP11.85□□□□□ -0.51
COPS4-211ENST00000511891 RASA1P20936 1047 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 TDO2P48775 406 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
COPS4-211ENST00000511891 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 LBX2Q6XYB7 198 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 SOCS4Q8WXH5 440 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
COPS4-211ENST00000511891 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.85□□□□□ -0.51
COPS4-211ENST00000511891 VCPKMTQ9H867 229 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 TMX2Q9Y320 296 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 MYH8P13535 1937 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 BRCA2P51587 3418 aa11.85□□□□□ -0.51
COPS4-211ENST00000511891 PATL2C9JE40 543 aaKnown RBP11.84□□□□□ -0.51
COPS4-211ENST00000511891 PRDM1O75626 825 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 ZKSCAN1P17029 563 aaPredicted RBP11.84□□□□□ -0.51
COPS4-211ENST00000511891 GNAT2P19087 354 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 RGS2P41220 211 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 CCNA1P78396 465 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 COG2Q14746 738 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 IER5LQ5T953 404 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 CCDC129Q6ZRS4 1044 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 IFNL3Q8IZI9 196 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
COPS4-211ENST00000511891 LPAR1Q92633 364 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms