RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CACNA2D2Q9NY47 1150 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 THSD7AQ9UPZ6 1657 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 PTPN23Q9H3S7 1636 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 CASKIN1Q8WXD9 1431 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 CROCC2H7BZ55 1655 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 FAM170BA6NMN3 283 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 ENC1O14682 589 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 LDHBP07195 334 aaKnown RBP8.57□□□□□ -1.04
GYPB-212ENST00000511198 PDIA4P13667 645 aaKnown RBP8.57□□□□□ -1.04
GYPB-212ENST00000511198 ID3Q02535 119 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 CPSF6Q16630 551 aaKnown RBP eCLIP8.57□□□□□ -1.04
GYPB-212ENST00000511198 SND1Q7KZF4 910 aaKnown RBP eCLIP8.57□□□□□ -1.045e-6■■■□□ 15.5
GYPB-212ENST00000511198 C12orf49Q9H741 205 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 PPM1HQ9ULR3 514 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 SPG7Q9UQ90 795 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 LEMD3Q9Y2U8 911 aa8.57□□□□□ -1.04
GYPB-212ENST00000511198 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 FBXO24O75426 580 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 PAGE1O75459 146 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 FOSL1P15407 271 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 YBX3P16989 372 aaKnown RBP eCLIP8.56□□□□□ -1.046e-7■■■□□ 14.8
GYPB-212ENST00000511198 BMP6P22004 513 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 MPRIPQ6WCQ1 1025 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 CEP44Q9C0F1 390 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 SLC52A1Q9NWF4 448 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 DAGLAQ9Y4D2 1042 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 WDR90Q96KV7 1748 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
GYPB-212ENST00000511198 NRAPQ86VF7 1730 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 MSMPQ1L6U9 139 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 MAP1SQ66K74 1059 aaPredicted RBP8.55□□□□□ -1.04
GYPB-212ENST00000511198 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.55□□□□□ -1.04
GYPB-212ENST00000511198 GRIN3AQ8TCU5 1115 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 METTL22Q9BUU2 404 aaPredicted RBP8.55□□□□□ -1.04
GYPB-212ENST00000511198 EMILIN2Q9BXX0 1053 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 MTFR1LQ9H019 292 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 ATXN3LQ9H3M9 355 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 ADCY9O60503 1353 aa8.55□□□□□ -1.04
GYPB-212ENST00000511198 SPATA31A5Q5VU36 1347 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 SPATA31A7Q8IWB4 1347 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 ANKRD33BA6NCL7 494 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 TSPY4P0CV99 314 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 TSPY10P0CW01 314 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 ZC3H12AQ5D1E8 599 aaKnown RBP8.54□□□□□ -1.04
GYPB-212ENST00000511198 RASIP1Q5U651 963 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 GPBAR1Q8TDU6 330 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 LGR6Q9HBX8 967 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
GYPB-212ENST00000511198 METP08581 1390 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 USP17L7P0C7H9 530 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 HSPA1AP0DMV8 641 aaKnown RBP8.53□□□□□ -1.04
GYPB-212ENST00000511198 HSPA1BP0DMV9 641 aaKnown RBP8.53□□□□□ -1.04
GYPB-212ENST00000511198 TTLL4Q14679 1199 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 COL19A1Q14993 1142 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 ZNF765Q7L2R6 523 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 CBX8Q9HC52 389 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 BTG4Q9NY30 223 aa8.53□□□□□ -1.04
GYPB-212ENST00000511198 GRIN3BO60391 1043 aa8.52□□□□□ -1.05
GYPB-212ENST00000511198 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
GYPB-212ENST00000511198 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.05
GYPB-212ENST00000511198 SMYD4Q8IYR2 804 aaPredicted RBP8.52□□□□□ -1.05
GYPB-212ENST00000511198 NLGN2Q8NFZ4 835 aa8.52□□□□□ -1.05
GYPB-212ENST00000511198 FRMD6Q96NE9 622 aa8.52□□□□□ -1.05
GYPB-212ENST00000511198 NEXMIFQ5QGS0 1516 aa8.52□□□□□ -1.05
GYPB-212ENST00000511198 ABCC5O15440 1437 aa8.52□□□□□ -1.05
GYPB-212ENST00000511198 GCC2Q8IWJ2 1684 aa8.52□□□□□ -1.05
GYPB-212ENST00000511198 TNRC18O15417 2968 aaPredicted RBP8.52□□□□□ -1.05
GYPB-212ENST00000511198 CYP26A1O43174 497 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 PRPF40AO75400 957 aaKnown RBP8.51□□□□□ -1.05
GYPB-212ENST00000511198 NEFMP07197 916 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 CELA3AP09093 270 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
GYPB-212ENST00000511198 GNA15P30679 374 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 OGFOD3Q6PK18 319 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
GYPB-212ENST00000511198 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 PIDD1Q9HB75 910 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 SAMM50Q9Y512 469 aa8.51□□□□□ -1.05
GYPB-212ENST00000511198 OAS3Q9Y6K5 1087 aaKnown RBP8.51□□□□□ -1.05
GYPB-212ENST00000511198 PLSCR1O15162 318 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 TOMM70O94826 608 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 WNT11O96014 354 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 ERVK-24P63145 666 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 CYP27A1Q02318 531 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 DUSP27Q5VZP5 1158 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 NRXN3Q9Y4C0 1643 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 FYCO1Q9BQS8 1478 aa8.5□□□□□ -1.05
GYPB-212ENST00000511198 KIAA1210Q9ULL0 1709 aa8.49□□□□□ -1.05
GYPB-212ENST00000511198 ARHGEF5Q12774 1597 aa8.49□□□□□ -1.05
GYPB-212ENST00000511198 CDK5R2Q13319 367 aa8.49□□□□□ -1.05
GYPB-212ENST00000511198 RNF214Q8ND24 703 aa8.49□□□□□ -1.05
GYPB-212ENST00000511198 DUSP9Q99956 384 aaKnown RBP8.49□□□□□ -1.05
GYPB-212ENST00000511198 AK5Q9Y6K8 562 aa8.49□□□□□ -1.05
GYPB-212ENST00000511198 RNGTTO60942 597 aaKnown RBP8.48□□□□□ -1.05
GYPB-212ENST00000511198 PRNPP04156 253 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 EIF4BP23588 611 aaKnown RBP8.48□□□□□ -1.05
GYPB-212ENST00000511198 RING1Q06587 406 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 SLC15A2Q16348 729 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms