RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 PCDHAC2Q9Y5I4 1007 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 DDTLA6NHG4 134 aaPredicted RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 WNT10BO00744 389 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 FIBPO43427 364 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 AKR1B1P15121 316 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 SMARCA1P28370 1054 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 GUCY1B3Q02153 619 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 KLHL40Q2TBA0 621 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 ASPRV1Q53RT3 343 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 METTL16Q86W50 562 aaKnown RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 GPC2Q8N158 579 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
DHFR-205ENST00000511032 NOVP48745 357 aa12.33□□□□□ -0.44
DHFR-205ENST00000511032 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
DHFR-205ENST00000511032 ABCB5Q2M3G0 1257 aa12.33□□□□□ -0.44
DHFR-205ENST00000511032 KIF4BQ2VIQ3 1234 aa12.33□□□□□ -0.44
DHFR-205ENST00000511032 TATDN1Q6P1N9 297 aa12.33□□□□□ -0.44
DHFR-205ENST00000511032 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
DHFR-205ENST00000511032 CCDC82Q8N4S0 544 aa12.33□□□□□ -0.44
DHFR-205ENST00000511032 CCDC12Q8WUD4 166 aaPredicted RBP12.33□□□□□ -0.44
DHFR-205ENST00000511032 SPATA32Q96LK8 384 aa12.33□□□□□ -0.44
DHFR-205ENST00000511032 SEC63Q9UGP8 760 aaKnown RBP12.33□□□□□ -0.44
DHFR-205ENST00000511032 SYNPO2Q9UMS6 1093 aa12.33□□□□□ -0.44
DHFR-205ENST00000511032 ELP1O95163 1332 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 IGKV6D-41A0A0C4DH26 115 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 TBC1D12O60347 775 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 CALML3P27482 149 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 UBE2HP62256 183 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
DHFR-205ENST00000511032 KRT40Q6A162 431 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 NBPF11Q86T75 865 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 ZFPM1Q8IX07 1006 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 CCDC148Q8NFR7 591 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 ZBED3Q96IU2 234 aaPredicted RBP12.32□□□□□ -0.44
DHFR-205ENST00000511032 SH2D4AQ9H788 454 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 LMBRD1Q9NUN5 540 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 MYH15Q9Y2K3 1946 aa12.32□□□□□ -0.44
DHFR-205ENST00000511032 CNTNAP5Q8WYK1 1306 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 KLRF2D3W0D1 207 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 DTNBO60941 627 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 PLEKHA8P1O95397 391 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 SCG2P13521 617 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 ICA1Q05084 483 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 SPZ1Q9BXG8 430 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
DHFR-205ENST00000511032 GINM1Q9NU53 330 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
DHFR-205ENST00000511032 V9GY48 417 aaPredicted RBP12.31□□□□□ -0.44
DHFR-205ENST00000511032 TCHHQ07283 1943 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 GREB1LQ9C091 1923 aaPredicted RBP12.3□□□□□ -0.44
DHFR-205ENST00000511032 MYH4Q9Y623 1939 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 SIPA1L1O43166 1804 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
DHFR-205ENST00000511032 hCG_1984214I3L0E3 225 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 MMP1P03956 469 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 KIF23Q02241 960 aaPredicted RBP12.3□□□□□ -0.44
DHFR-205ENST00000511032 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
DHFR-205ENST00000511032 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 GALNT17Q6IS24 598 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 SH3BP5LQ7L8J4 393 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 ZNF713Q8N859 430 aaPredicted RBP12.3□□□□□ -0.44
DHFR-205ENST00000511032 RRP36Q96EU6 259 aaKnown RBP12.3□□□□□ -0.44
DHFR-205ENST00000511032 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 RNF181Q9P0P0 153 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
DHFR-205ENST00000511032 ZNF541Q9H0D2 1346 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 PDHBP11177 359 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 KRT2P35908 639 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 NLRP5P59047 1200 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 CCDC96Q2M329 555 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 LRRC47Q8N1G4 583 aaKnown RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 SRBD1Q8N5C6 995 aaKnown RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 KCNG4Q8TDN1 519 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 DCAF4Q8WV16 495 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 MKL1Q969V6 931 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.449e-11■■□□□ 14.2
DHFR-205ENST00000511032 GPRC5DQ9NZD1 345 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 ISY1Q9ULR0 285 aaKnown RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 NOL7Q9UMY1 257 aaKnown RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 SBF1O95248 1867 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 CNTNAP1P78357 1384 aa12.29□□□□□ -0.44
DHFR-205ENST00000511032 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
DHFR-205ENST00000511032 GRIN3BO60391 1043 aa12.28□□□□□ -0.44
DHFR-205ENST00000511032 YEATS4O95619 227 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms