RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 PCDHB10Q9UN67 800 aa6.06□□□□□ -1.44
SMAD1-208ENST00000510948 SHANK2Q9UPX8 1470 aa6.06□□□□□ -1.44
SMAD1-208ENST00000510948 ASXL2Q76L83 1435 aa6.06□□□□□ -1.44
SMAD1-208ENST00000510948 MAP3K4Q9Y6R4 1608 aa6.06□□□□□ -1.44
SMAD1-208ENST00000510948 DIP2BQ9P265 1576 aa6.06□□□□□ -1.44
SMAD1-208ENST00000510948 MAST1Q9Y2H9 1570 aa6.06□□□□□ -1.44
SMAD1-208ENST00000510948 SYCP2Q9BX26 1530 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 FAM86C2PA6NEL3 165 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 SPDYE3A6NKU9 549 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 RGS13O14921 159 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 WISP1O95388 367 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 NTF4P34130 210 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 SLC7A5Q01650 507 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 SOX4Q06945 474 aaPredicted RBP6.05□□□□□ -1.44
SMAD1-208ENST00000510948 TRIM28Q13263 835 aaKnown RBP6.05□□□□□ -1.44
SMAD1-208ENST00000510948 TTLL4Q14679 1199 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 GNPTABQ3T906 1256 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 C2orf27AQ580R0 203 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 RNF187Q5TA31 235 aaPredicted RBP6.05□□□□□ -1.44
SMAD1-208ENST00000510948 KIAA1211LQ6NV74 962 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 LINC00114Q6XXX2 140 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 ACAD11Q709F0 780 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 PHACTR4Q8IZ21 702 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 C12orf50Q8NA57 414 aaPredicted RBP6.05□□□□□ -1.44
SMAD1-208ENST00000510948 KCT2Q8NC54 265 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 TRIM11Q96F44 468 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 CCDC74BQ96LY2 380 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 EPN3Q9H201 632 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 PFDN2Q9UHV9 154 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 ZMYM5Q9UJ78 669 aa6.05□□□□□ -1.44
SMAD1-208ENST00000510948 ZNF214Q9UL59 606 aaPredicted RBP6.05□□□□□ -1.44
SMAD1-208ENST00000510948 ARHGAP5Q13017 1502 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 ADGRL2O95490 1459 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 DIAPH1O60610 1272 aaKnown RBP6.04□□□□□ -1.44
SMAD1-208ENST00000510948 ADH5P11766 374 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 DRD2P14416 443 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 SSRP1Q08945 709 aaKnown RBP6.04□□□□□ -1.44
SMAD1-208ENST00000510948 SQSTM1Q13501 440 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 BBS9Q3SYG4 887 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 ZNF385CQ66K41 422 aaPredicted RBP6.04□□□□□ -1.44
SMAD1-208ENST00000510948 DYMQ7RTS9 669 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 KLHL6Q8WZ60 621 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 KIF2CQ99661 725 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 MRPL18Q9H0U6 180 aaKnown RBP6.04□□□□□ -1.44
SMAD1-208ENST00000510948 GSX1Q9H4S2 264 aaPredicted RBP6.04□□□□□ -1.44
SMAD1-208ENST00000510948 FBRSQ9HAH7 460 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 DAPK1P53355 1430 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 PLXNC1O60486 1568 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 KIF13AQ9H1H9 1805 aa6.04□□□□□ -1.44
SMAD1-208ENST00000510948 CCDC141Q6ZP82 1450 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 GLI2P10070 1586 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 HFM1A2PYH4 1435 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 PTPRKQ15262 1439 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 PLEKHD1A6NEE1 506 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 WFS1O76024 890 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 TIAF1O95411 115 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 NEFMP07197 916 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 HCLS1P14317 486 aaPredicted RBP6.03□□□□□ -1.44
SMAD1-208ENST00000510948 ELNP15502 786 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 POLR2BP30876 1174 aaKnown RBP6.03□□□□□ -1.44
SMAD1-208ENST00000510948 GBP1P32455 592 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 CAP2P40123 477 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 SNRPNP63162 240 aaKnown RBP6.03□□□□□ -1.44
SMAD1-208ENST00000510948 SLBPQ14493 270 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMAD1-208ENST00000510948 NKG7Q16617 165 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 LCE2CQ5TA81 110 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 C16orf86Q6ZW13 317 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.03□□□□□ -1.44
SMAD1-208ENST00000510948 KIAA0907Q7Z7F0 614 aaPredicted RBP6.03□□□□□ -1.44
SMAD1-208ENST00000510948 TMEM192Q8IY95 271 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 TMEM130Q8N3G9 435 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 SLKQ9H2G2 1235 aaPredicted RBP6.03□□□□□ -1.44
SMAD1-208ENST00000510948 PIDD1Q9HB75 910 aa6.03□□□□□ -1.44
SMAD1-208ENST00000510948 PLEKHH2Q8IVE3 1493 aa6.02□□□□□ -1.44
SMAD1-208ENST00000510948 INO80Q9ULG1 1556 aaPredicted RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 PPRC1Q5VV67 1664 aaKnown RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 PIK3R2O00459 728 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 GNB5O14775 395 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 SUSD5O60279 629 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 RNGTTO60942 597 aaKnown RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 CST3P01034 146 aaPredicted RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 ASPAP45381 313 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 PMS1P54277 932 aaKnown RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 PTPROQ16827 1216 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 LONRF2Q1L5Z9 754 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 FDX2Q6P4F2 183 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 SVOPQ8N4V2 548 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 ISL2Q96A47 359 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 SLC6A18Q96N87 628 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 SPATA9Q9BWV2 254 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 TMX1Q9H3N1 280 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 CWC22Q9HCG8 908 aaKnown RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 SSU72Q9NP77 194 aaKnown RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 SUCOQ9UBS9 1254 aaKnown RBP6.02□□□□□ -1.45
SMAD1-208ENST00000510948 PRKAB1Q9Y478 270 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 MBD5Q9P267 1494 aa6.02□□□□□ -1.45
SMAD1-208ENST00000510948 ABCC5O15440 1437 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms