RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ZMYM6O95789 1325 aa5.82□□□□□ -1.48
PHF3-210ENST00000509876 CCT6AP40227 531 aaKnown RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 OTUD6AQ7L8S5 288 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 ATG9AQ7Z3C6 839 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 HACE1Q8IYU2 909 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 FAM151AQ8WW52 585 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 GLG1Q92896 1179 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 DYNLL2Q96FJ2 89 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 TCHPQ9BT92 498 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 TMEM106CQ9BVX2 250 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 TM6SF1Q9BZW5 370 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.81□□□□□ -1.484e-6■■■■■ 40.2
PHF3-210ENST00000509876 GINM1Q9NU53 330 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 SEPT11Q9NVA2 429 aaKnown RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 DAGLAQ9Y4D2 1042 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 ZNF397Q8NF99 534 aaPredicted RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 TTC14Q96N46 770 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 MYL10Q9BUA6 226 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L15C9J2P7 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 C19orf81C9J6K1 198 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L13C9JLJ4 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L11C9JVI0 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L18D6R9N7 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L22D6RA61 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L17D6RBQ6 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L19D6RCP7 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L20D6RJB6 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 DDX39AO00148 427 aaKnown RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 FDX1P10109 184 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 KRT13P13646 458 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 USP17L24Q0WX57 530 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 NCAPH2Q6IBW4 605 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 KCTD1Q719H9 257 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 FBXO33Q7Z6M2 555 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 RSPH3Q86UC2 560 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 ANKRD13AQ8IZ07 590 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 LMO7Q8WWI1 1683 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 ONECUT3O60422 494 aaPredicted RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 PLCD1P51178 756 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 GTF2A2P52657 109 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 TAF1CQ15572 869 aaPredicted RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 FANCBQ8NB91 859 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 TDRD7Q8NHU6 1098 aaKnown RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 DEF6Q9H4E7 631 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 TRPC6Q9Y210 931 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 PCDHA1Q9Y5I3 950 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 LTBP4Q8N2S1 1624 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 GOLGA8HP0CJ92 632 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 CCDC40Q4G0X9 1142 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 ATL3Q6DD88 541 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 MIER3Q7Z3K6 550 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 ZNF274Q96GC6 653 aaPredicted RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 CDHR1Q96JP9 859 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 POLLQ9UGP5 575 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 KCNH4Q9UQ05 1017 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 RGPD8O14715 1765 aaPredicted RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 CALCRLQ16602 461 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 SLFN12Q8IYM2 578 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 RAET1EQ8TD07 263 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 FERMT2Q96AC1 680 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 TRIM5Q9C035 493 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 OSBPL5Q9H0X9 879 aaPredicted RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 DDX19AQ9NUU7 478 aaKnown RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 ANO10Q9NW15 660 aa5.81□□□□□ -1.48
PHF3-210ENST00000509876 ZHX1Q9UKY1 873 aaPredicted RBP5.81□□□□□ -1.48
PHF3-210ENST00000509876 GAS7O60861 476 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 STRN3Q13033 797 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 SAMD7Q7Z3H4 446 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 OSBP2Q969R2 916 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 SNX21Q969T3 373 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 STRBPQ96SI9 672 aaKnown RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 MAP7D2Q96T17 732 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 EXOC7Q9UPT5 735 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 PHRF1Q9P1Y6 1649 aaKnown RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 ARHGEF35A5YM69 484 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 TM4SF1P30408 202 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 UBXN2AP68543 259 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 TEKT3Q9BXF9 490 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 GBA2Q9HCG7 927 aaPredicted RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 PHACTR2O75167 634 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 ASIC1P78348 528 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 BMS1Q14692 1282 aaKnown RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 NSUN4Q96CB9 384 aaKnown RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 INTS4Q96HW7 963 aaKnown RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 SNAP23O00161 211 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 TRAK2O60296 914 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 GSPT1P15170 499 aaKnown RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 HOXA10P31260 410 aaPredicted RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 SYKP43405 635 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 ZNF174Q15697 407 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 CDC42EP5Q6NZY7 148 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 MMP19Q99542 508 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 NRBP2Q9NSY0 501 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 PODXL2Q9NZ53 605 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 SCG2P13521 617 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 TTC38Q5R3I4 469 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 SV2BQ7L1I2 683 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 SYT17Q9BSW7 474 aa5.8□□□□□ -1.48
PHF3-210ENST00000509876 TRIM6Q9C030 488 aaPredicted RBP5.8□□□□□ -1.48
PHF3-210ENST00000509876 DEFB129Q9H1M3 183 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms