RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TDHQ8IZJ6 230 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.31■□□□□ 0.68
RAB40C-202ENST00000509637 SENP6Q9GZR1 1112 aaPredicted RBP19.31■□□□□ 0.68
RAB40C-202ENST00000509637 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 MTMR10Q9NXD2 777 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 DDX20Q9UHI6 824 aaKnown RBP19.31■□□□□ 0.68
RAB40C-202ENST00000509637 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 A0A0G2JMZ2 1700 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 CCNA1P78396 465 aa19.3■□□□□ 0.68
RAB40C-202ENST00000509637 COG2Q14746 738 aa19.3■□□□□ 0.68
RAB40C-202ENST00000509637 MFSD14CQ5VZR4 134 aa19.3■□□□□ 0.68
RAB40C-202ENST00000509637 DEFB123Q8N688 67 aa19.3■□□□□ 0.68
RAB40C-202ENST00000509637 SLC17A8Q8NDX2 589 aa19.3■□□□□ 0.68
RAB40C-202ENST00000509637 CRNKL1Q9BZJ0 848 aaKnown RBP19.3■□□□□ 0.68
RAB40C-202ENST00000509637 UBE2OQ9C0C9 1292 aaKnown RBP19.3■□□□□ 0.68
RAB40C-202ENST00000509637 BOLA2Q9H3K6 86 aa19.3■□□□□ 0.68
RAB40C-202ENST00000509637 DNAH12Q6ZR08 3092 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 MPHOSPH10O00566 681 aaKnown RBP19.29■□□□□ 0.68
RAB40C-202ENST00000509637 ERCC3P19447 782 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 ADORA2AP29274 412 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 DSG3P32926 999 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 ADD2P35612 726 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 ATN1P54259 1190 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-202ENST00000509637 ATP2B2Q01814 1243 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 ATG4CQ96DT6 458 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 SPATC1LQ9H0A9 340 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 PARP14Q460N5 1801 aa19.29■□□□□ 0.68
RAB40C-202ENST00000509637 ZNFX1Q9P2E3 1918 aaKnown RBP19.28■□□□□ 0.68
RAB40C-202ENST00000509637 MBD4O95243 580 aa19.28■□□□□ 0.68
RAB40C-202ENST00000509637 CNGA1P29973 690 aa19.28■□□□□ 0.68
RAB40C-202ENST00000509637 TTF1Q15361 905 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-202ENST00000509637 GJC2Q5T442 439 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-202ENST00000509637 TMED8Q6PL24 325 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-202ENST00000509637 SPICE1Q8N0Z3 855 aa19.28■□□□□ 0.68
RAB40C-202ENST00000509637 LPAR1Q92633 364 aa19.28■□□□□ 0.68
RAB40C-202ENST00000509637 KIF1BPQ96EK5 621 aa19.28■□□□□ 0.68
RAB40C-202ENST00000509637 C12orf60Q5U649 245 aa19.27■□□□□ 0.68
RAB40C-202ENST00000509637 RPAP2Q8IXW5 612 aaPredicted RBP19.27■□□□□ 0.68
RAB40C-202ENST00000509637 CLASRPQ8N2M8 674 aaKnown RBP19.27■□□□□ 0.68
RAB40C-202ENST00000509637 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
RAB40C-202ENST00000509637 FBXO28Q9NVF7 368 aa19.27■□□□□ 0.68
RAB40C-202ENST00000509637 TMX2Q9Y320 296 aa19.27■□□□□ 0.68
RAB40C-202ENST00000509637 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 ZNF236Q9UL36 1845 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 USP17L12C9JPN9 530 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 USP17L21D6R901 530 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 DLL1O00548 723 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 GLRX3O76003 335 aaKnown RBP19.26■□□□□ 0.67
RAB40C-202ENST00000509637 ATP5JP18859 108 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 CDK8P49336 464 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 HSP90AB4PQ58FF6 505 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 C20orf194Q5TEA3 1177 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 GPR153Q6NV75 609 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 TMEM179Q6ZVK1 233 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 TANGO6Q9C0B7 1094 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 CWC22Q9HCG8 908 aaKnown RBP19.26■□□□□ 0.67
RAB40C-202ENST00000509637 PAG1Q9NWQ8 432 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 HOXC10Q9NYD6 342 aa19.26■□□□□ 0.67
RAB40C-202ENST00000509637 SMARCA5O60264 1052 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-202ENST00000509637 RTP1P59025 263 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 TMEM132BQ14DG7 1078 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 OLFML2BQ68BL8 750 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 SHCBP1Q8NEM2 672 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 HAUS7Q99871 368 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 PUS7LQ9H0K6 701 aaKnown RBP19.25■□□□□ 0.67
RAB40C-202ENST00000509637 VCPKMTQ9H867 229 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 ADAMTS5Q9UNA0 930 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 IVNS1ABPQ9Y6Y0 642 aa19.25■□□□□ 0.67
RAB40C-202ENST00000509637 COL11A1P12107 1806 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-202ENST00000509637 LTBP2Q14767 1821 aa19.24■□□□□ 0.67
RAB40C-202ENST00000509637 POTEB2H3BUK9 544 aa19.24■□□□□ 0.67
RAB40C-202ENST00000509637 DNM1LO00429 736 aa19.24■□□□□ 0.67
RAB40C-202ENST00000509637 IFIT2P09913 472 aaKnown RBP19.24■□□□□ 0.67
RAB40C-202ENST00000509637 DPP9Q86TI2 863 aa19.24■□□□□ 0.67
RAB40C-202ENST00000509637 EEF2P13639 858 aaKnown RBP19.23■□□□□ 0.67
RAB40C-202ENST00000509637 TAL1P17542 331 aaPredicted RBP19.23■□□□□ 0.67
RAB40C-202ENST00000509637 CTR9Q6PD62 1173 aa19.23■□□□□ 0.67
RAB40C-202ENST00000509637 SLC39A5Q6ZMH5 540 aa19.23■□□□□ 0.67
RAB40C-202ENST00000509637 C16orf86Q6ZW13 317 aa19.23■□□□□ 0.67
RAB40C-202ENST00000509637 SH3RF1Q7Z6J0 888 aa19.23■□□□□ 0.67
RAB40C-202ENST00000509637 REPS2Q8NFH8 660 aa19.23■□□□□ 0.67
RAB40C-202ENST00000509637 MYH8P13535 1937 aa19.23■□□□□ 0.67
RAB40C-202ENST00000509637 STRNO43815 780 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 RAB11FIP3O75154 756 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 FLOT1O75955 427 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 ICA1Q05084 483 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 PLS1Q14651 629 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 SAMD1Q6SPF0 538 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-202ENST00000509637 NCAPG2Q86XI2 1143 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 MAML3Q96JK9 1138 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 GUCD1Q96NT3 240 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 ATP8A2Q9NTI2 1148 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 SWAP70Q9UH65 585 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 STXBP5LQ9Y2K9 1186 aa19.22■□□□□ 0.67
RAB40C-202ENST00000509637 SEPT4O43236 478 aa19.21■□□□□ 0.67
RAB40C-202ENST00000509637 PGK2P07205 417 aa19.21■□□□□ 0.67
RAB40C-202ENST00000509637 ITGB8P26012 769 aa19.21■□□□□ 0.67
RAB40C-202ENST00000509637 FAM47AQ5JRC9 791 aa19.21■□□□□ 0.67
RAB40C-202ENST00000509637 C9orf50Q5SZB4 431 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms