RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PRDX5P30044 214 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 KIF5BP33176 963 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 NR1I3Q14994 352 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 KMT5BQ4FZB7 885 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 TRIM65Q6PJ69 517 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 TC2NQ8N9U0 490 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 NARFQ9UHQ1 456 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 CASZ1Q86V15 1759 aa20.39■□□□□ 0.86
CCHCR1-228ENST00000509552 SYNRGQ9UMZ2 1314 aa20.39■□□□□ 0.85
CCHCR1-228ENST00000509552 A0A1B0GTH6 734 aa20.39■□□□□ 0.85
CCHCR1-228ENST00000509552 KCNQ4P56696 695 aa20.39■□□□□ 0.85
CCHCR1-228ENST00000509552 DPYDQ12882 1025 aa20.39■□□□□ 0.85
CCHCR1-228ENST00000509552 SPTY2D1Q68D10 685 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-228ENST00000509552 SRRTQ9BXP5 876 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-228ENST00000509552 ADKP55263 362 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 PFKFB3Q16875 520 aaPredicted RBP20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 KLHL10Q6JEL2 608 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 TPTE2Q6XPS3 522 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 IQUBQ8NA54 791 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 WNT7AO00755 349 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 ZPR1O75312 459 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 PIK3AP1Q6ZUJ8 805 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 CTAGE1Q96RT6 745 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 MYH13Q9UKX3 1938 aa20.38■□□□□ 0.85
CCHCR1-228ENST00000509552 CYP2D6P10635 497 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 ZSCAN20P17040 1043 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 EVX2Q03828 476 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 CUL4BQ13620 913 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 NOM1Q5C9Z4 860 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 FBXO38Q6PIJ6 1188 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 DZIP1Q86YF9 867 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 NPHP1O15259 732 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 CALML3P27482 149 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 NT5C2P49902 561 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 FILIP1LQ4L180 1135 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 RC3H1Q5TC82 1133 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 KAT14Q9H8E8 782 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 MCM9Q9NXL9 1143 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 LAMB1P07942 1786 aa20.37■□□□□ 0.85
CCHCR1-228ENST00000509552 AKR1B15C9JRZ8 316 aaPredicted RBP20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 RPS6KA4O75676 772 aa20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 URI1O94763 535 aaPredicted RBP20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 STX17P56962 302 aa20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 FAM98CQ17RN3 349 aaKnown RBP20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 ERCC6LQ2NKX8 1250 aa20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 CD44P16070 742 aaKnown RBP20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 CASP1P29466 404 aa20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 SMIM5Q71RC9 77 aa20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 PPFIBP1Q86W92 1011 aa20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 MNS1Q8NEH6 495 aa20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 SRP68Q9UHB9 627 aaKnown RBP20.36■□□□□ 0.85
CCHCR1-228ENST00000509552 MCM7P33993 719 aa20.35■□□□□ 0.85
CCHCR1-228ENST00000509552 DMTNQ08495 405 aa20.35■□□□□ 0.85
CCHCR1-228ENST00000509552 GTPBP4Q9BZE4 634 aaKnown RBP20.35■□□□□ 0.85
CCHCR1-228ENST00000509552 UTP14CQ5TAP6 766 aaKnown RBP20.35■□□□□ 0.85
CCHCR1-228ENST00000509552 PANX2Q96RD6 677 aa20.35■□□□□ 0.85
CCHCR1-228ENST00000509552 PPP1R3GB7ZBB8 358 aa20.34■□□□□ 0.85
CCHCR1-228ENST00000509552 CASQ1P31415 396 aa20.34■□□□□ 0.85
CCHCR1-228ENST00000509552 CDKAL1Q5VV42 579 aa20.34■□□□□ 0.85
CCHCR1-228ENST00000509552 DGKHQ86XP1 1220 aa20.34■□□□□ 0.85
CCHCR1-228ENST00000509552 FAM177A1Q8N128 213 aaPredicted RBP20.34■□□□□ 0.85
CCHCR1-228ENST00000509552 UBXN4Q92575 508 aa20.34■□□□□ 0.85
CCHCR1-228ENST00000509552 MAST2Q6P0Q8 1798 aa20.34■□□□□ 0.85
CCHCR1-228ENST00000509552 IGSF3O75054 1194 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 USP5P45974 858 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 TFAP4Q01664 338 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 E2F4Q16254 413 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 ARL6IP4Q66PJ3 421 aaKnown RBP20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 RCSD1Q6JBY9 416 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 TOGARAM2Q6ZUX3 1019 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 NAA15Q9BXJ9 866 aaKnown RBP20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 SH3GLB2Q9NR46 395 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.85
CCHCR1-228ENST00000509552 ZBTB22O15209 634 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 GNPATO15228 680 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 TEX33O43247 280 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 USP17L8P0C7I0 530 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 TXLNAP40222 546 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 GNG11P61952 73 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 CCDC178Q5BJE1 867 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 APTXQ7Z2E3 356 aaKnown RBP20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 AMOTL1Q8IY63 956 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 SMYD4Q8IYR2 804 aaPredicted RBP20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 BLIDQ8IZY5 108 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 IGSF22Q8N9C0 903 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 ADD3Q9UEY8 706 aaKnown RBP20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 JAG2Q9Y219 1238 aa20.33■□□□□ 0.84
CCHCR1-228ENST00000509552 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 LRRN4CLQ8ND94 238 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 STAMQ92783 540 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 PARP3Q9Y6F1 533 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 XDHP47989 1333 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 KIAA1551Q9HCM1 1747 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 GTPBP6O43824 516 aaPredicted RBP20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 LDHBP07195 334 aaKnown RBP20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 H2AFXP16104 143 aaPredicted RBP20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 LONP1P36776 959 aaKnown RBP20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 GNAQP50148 359 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 ARHGAP29Q52LW3 1261 aa20.32■□□□□ 0.84
CCHCR1-228ENST00000509552 C12orf60Q5U649 245 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms