RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 RPAP3Q9H6T3 665 aaPredicted RBP17.55■□□□□ 0.4
HMGCL-208ENST00000509389 CWC22Q9HCG8 908 aaKnown RBP17.55■□□□□ 0.4
HMGCL-208ENST00000509389 BTBD7Q9P203 1132 aa17.55■□□□□ 0.4
HMGCL-208ENST00000509389 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
HMGCL-208ENST00000509389 MYH7P12883 1935 aa17.55■□□□□ 0.4
HMGCL-208ENST00000509389 SPDYE16A6NNV3 312 aaPredicted RBP17.54■□□□□ 0.4
HMGCL-208ENST00000509389 PRKAB2O43741 272 aa17.54■□□□□ 0.4
HMGCL-208ENST00000509389 MAP2K5Q13163 448 aa17.54■□□□□ 0.4
HMGCL-208ENST00000509389 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
HMGCL-208ENST00000509389 SLC44A5Q8NCS7 719 aa17.54■□□□□ 0.4
HMGCL-208ENST00000509389 HAUS7Q99871 368 aa17.54■□□□□ 0.4
HMGCL-208ENST00000509389 LRRCC1Q9C099 1032 aa17.54■□□□□ 0.4
HMGCL-208ENST00000509389 GLRX3O76003 335 aaKnown RBP17.53■□□□□ 0.4
HMGCL-208ENST00000509389 MBD4O95243 580 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 CCND3P30281 292 aaPredicted RBP17.53■□□□□ 0.4
HMGCL-208ENST00000509389 WDR78Q5VTH9 848 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 DYNLL2Q96FJ2 89 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 ATP8A2Q9NTI2 1148 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 SWAP70Q9UH65 585 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 SLC15A5A6NIM6 579 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 CHGBP05060 677 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 PTPREP23469 700 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 TMEM179Q6ZVK1 233 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.53■□□□□ 0.4
HMGCL-208ENST00000509389 OSBPL3Q9H4L5 887 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 STAP2Q9UGK3 403 aa17.53■□□□□ 0.4
HMGCL-208ENST00000509389 RLFQ13129 1914 aa17.52■□□□□ 0.4
HMGCL-208ENST00000509389 LHX8Q68G74 356 aa17.52■□□□□ 0.39
HMGCL-208ENST00000509389 C7orf61Q8IZ16 206 aa17.52■□□□□ 0.39
HMGCL-208ENST00000509389 FLRT1Q9NZU1 646 aa17.52■□□□□ 0.39
HMGCL-208ENST00000509389 CYP2D7A0A087X1C5 515 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 SMARCA5O60264 1052 aaPredicted RBP17.51■□□□□ 0.39
HMGCL-208ENST00000509389 AKR1B1P15121 316 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 COG2Q14746 738 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 UBE3CQ15386 1083 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 KIAA1755Q5JYT7 1200 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 C12orf60Q5U649 245 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 SIAH1Q8IUQ4 282 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 PLEKHM2Q8IWE5 1019 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 HOXC10Q9NYD6 342 aa17.51■□□□□ 0.39
HMGCL-208ENST00000509389 SZT2Q5T011 3432 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 A0A1W2PPC1 479 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 PFASO15067 1338 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 HOXC6P09630 235 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 GRB14Q14449 540 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 FRMPD3Q5JV73 1810 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 MFSD14CQ5VZR4 134 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 CLEC10AQ8IUN9 316 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 TANGO6Q9C0B7 1094 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-208ENST00000509389 IVNS1ABPQ9Y6Y0 642 aa17.5■□□□□ 0.39
HMGCL-208ENST00000509389 A0A0G2JMZ2 1700 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 USP17L12C9JPN9 530 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 USP17L21D6R901 530 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 COL6A1P12109 1028 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 CDK8P49336 464 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 NPLOC4Q8TAT6 608 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 GDF15Q99988 308 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 MOV10L1Q9BXT6 1211 aaKnown RBP17.49■□□□□ 0.39
HMGCL-208ENST00000509389 ARHGEF10LQ9HCE6 1279 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 TMX2Q9Y320 296 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 SLC4A4Q9Y6R1 1079 aa17.49■□□□□ 0.39
HMGCL-208ENST00000509389 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 ICA1Q05084 483 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 ZSCAN25Q6NSZ9 544 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 C16orf86Q6ZW13 317 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 AMOTL1Q8IY63 956 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
HMGCL-208ENST00000509389 LPAR1Q92633 364 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 SPATC1LQ9H0A9 340 aa17.48■□□□□ 0.39
HMGCL-208ENST00000509389 PUS7LQ9H0K6 701 aaKnown RBP17.48■□□□□ 0.39
HMGCL-208ENST00000509389 PARP14Q460N5 1801 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 SYN1P17600 705 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 DSG3P32926 999 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 C8orf34Q49A92 452 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 SPICE1Q8N0Z3 855 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 DDRGK1Q96HY6 314 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 SH2D4AQ9H788 454 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
HMGCL-208ENST00000509389 STRNO43815 780 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 IGHA2P01877 340 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 CYP2C19P33261 490 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 BMP8BP34820 402 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 CTR9Q6PD62 1173 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 MB21D1Q8N884 522 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 SHCBP1Q8NEM2 672 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 ECHDC1Q9NTX5 307 aa17.46■□□□□ 0.39
HMGCL-208ENST00000509389 SOX1O00570 391 aaPredicted RBP17.45■□□□□ 0.38
HMGCL-208ENST00000509389 FLOT1O75955 427 aa17.45■□□□□ 0.38
HMGCL-208ENST00000509389 ERCC3P19447 782 aa17.45■□□□□ 0.38
HMGCL-208ENST00000509389 ADORA2AP29274 412 aa17.45■□□□□ 0.38
HMGCL-208ENST00000509389 CNGA1P29973 690 aa17.45■□□□□ 0.38
HMGCL-208ENST00000509389 PDE1AP54750 535 aa17.45■□□□□ 0.38
HMGCL-208ENST00000509389 DPP9Q86TI2 863 aa17.45■□□□□ 0.38
HMGCL-208ENST00000509389 TRPV1Q8NER1 839 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms