RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 USP17L15C9J2P7 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L13C9JLJ4 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L11C9JVI0 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L18D6R9N7 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L22D6RA61 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L17D6RBQ6 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L19D6RCP7 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L20D6RJB6 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
RNF4-212ENST00000509258 VCAM1P19320 739 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
RNF4-212ENST00000509258 USP17L24Q0WX57 530 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 MORN1Q5T089 497 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 C12orf60Q5U649 245 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 RABGAP1Q9Y3P9 1069 aa13.15□□□□□ -0.3
RNF4-212ENST00000509258 PFASO15067 1338 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 SALL3Q9BXA9 1300 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 USP17L21D6R901 530 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 M0R2C6 588 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 MAP2K5Q13163 448 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 CCL14Q16627 93 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 GPR153Q6NV75 609 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
RNF4-212ENST00000509258 GSG1L2A8MUP6 293 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 MPHOSPH10O00566 681 aaKnown RBP13.13□□□□□ -0.31
RNF4-212ENST00000509258 COL6A1P12109 1028 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 SYN1P17600 705 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
RNF4-212ENST00000509258 MAGEA10P43363 369 aaPredicted RBP13.13□□□□□ -0.31
RNF4-212ENST00000509258 CDK8P49336 464 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 CTR9Q6PD62 1173 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 LBX2Q6XYB7 198 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 CATSPERGQ6ZRH7 1159 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
RNF4-212ENST00000509258 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
RNF4-212ENST00000509258 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.31
RNF4-212ENST00000509258 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
RNF4-212ENST00000509258 ATP8A2Q9NTI2 1148 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 SLC4A4Q9Y6R1 1079 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
RNF4-212ENST00000509258 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 ZNF236Q9UL36 1845 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 SLC15A5A6NIM6 579 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 SPDYE16A6NNV3 312 aaPredicted RBP13.12□□□□□ -0.31
RNF4-212ENST00000509258 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 WDR78Q5VTH9 848 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 LHX8Q68G74 356 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 C16orf86Q6ZW13 317 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 TDHQ8IZJ6 230 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
RNF4-212ENST00000509258 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF4-212ENST00000509258 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
RNF4-212ENST00000509258 DNAH12Q6ZR08 3092 aa13.11□□□□□ -0.31
RNF4-212ENST00000509258 RNF113AO15541 343 aaKnown RBP13.11□□□□□ -0.31
RNF4-212ENST00000509258 MSCO60682 206 aa13.11□□□□□ -0.31
RNF4-212ENST00000509258 HOXC6P09630 235 aa13.11□□□□□ -0.31
RNF4-212ENST00000509258 GRB14Q14449 540 aa13.11□□□□□ -0.31
RNF4-212ENST00000509258 UBE2OQ9C0C9 1292 aaKnown RBP13.11□□□□□ -0.31
RNF4-212ENST00000509258 MCM3APO60318 1980 aa13.11□□□□□ -0.31
RNF4-212ENST00000509258 COL6A3P12111 3177 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 FOXP2O15409 715 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 PTPREP23469 700 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 APPBP2Q92624 585 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 FLRT1Q9NZU1 646 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 SWAP70Q9UH65 585 aa13.1□□□□□ -0.31
RNF4-212ENST00000509258 DDX20Q9UHI6 824 aaKnown RBP13.1□□□□□ -0.31
RNF4-212ENST00000509258 GPAA1O43292 621 aa13.09□□□□□ -0.31
RNF4-212ENST00000509258 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
RNF4-212ENST00000509258 ICA1Q05084 483 aa13.09□□□□□ -0.31
RNF4-212ENST00000509258 LRRC26Q2I0M4 334 aa13.09□□□□□ -0.31
RNF4-212ENST00000509258 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
RNF4-212ENST00000509258 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.31
RNF4-212ENST00000509258 CUL9Q8IWT3 2517 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 DLL1O00548 723 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
RNF4-212ENST00000509258 RASA1P20936 1047 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 COG2Q14746 738 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 SBK1Q52WX2 424 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 ZSCAN25Q6NSZ9 544 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 DEFB123Q8N688 67 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 LPAR1Q92633 364 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 FBXO28Q9NVF7 368 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 TMX2Q9Y320 296 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
RNF4-212ENST00000509258 DNM1LO00429 736 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms