RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 VWCEQ96DN2 955 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 ZNF512BQ96KM6 892 aaPredicted RBP11.43□□□□□ -0.58
CHD1-205ENST00000508756 SLC6A18Q96N87 628 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 ASPNQ9BXN1 380 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHD1-205ENST00000508756 VAV3Q9UKW4 847 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
CHD1-205ENST00000508756 CLEC3AO75596 197 aa11.42□□□□□ -0.58
CHD1-205ENST00000508756 GUCY2CP25092 1073 aa11.42□□□□□ -0.58
CHD1-205ENST00000508756 CCNFP41002 786 aa11.42□□□□□ -0.58
CHD1-205ENST00000508756 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
CHD1-205ENST00000508756 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
CHD1-205ENST00000508756 STK11IPQ8N1F8 1099 aa11.42□□□□□ -0.58
CHD1-205ENST00000508756 TAB3Q8N5C8 712 aaPredicted RBP11.42□□□□□ -0.58
CHD1-205ENST00000508756 PIWIL2Q8TC59 973 aaKnown RBP11.41□□□□□ -0.58
CHD1-205ENST00000508756 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
CHD1-205ENST00000508756 FBXL18Q96ME1 805 aa11.41□□□□□ -0.58
CHD1-205ENST00000508756 PAK6Q9NQU5 681 aaPredicted RBP11.41□□□□□ -0.58
CHD1-205ENST00000508756 SEMA3GQ9NS98 782 aa11.41□□□□□ -0.58
CHD1-205ENST00000508756 STRIP2Q9ULQ0 834 aa11.41□□□□□ -0.58
CHD1-205ENST00000508756 CD8BP10966 210 aa11.4□□□□□ -0.58
CHD1-205ENST00000508756 DNAJA1P31689 397 aaKnown RBP11.4□□□□□ -0.58
CHD1-205ENST00000508756 ZC3H6P61129 1189 aaKnown RBP11.4□□□□□ -0.58
CHD1-205ENST00000508756 NBPF12Q5TAG4 269 aaPredicted RBP11.4□□□□□ -0.58
CHD1-205ENST00000508756 UNC5AQ6ZN44 842 aa11.4□□□□□ -0.58
CHD1-205ENST00000508756 FAM169BQ8N8A8 192 aa11.4□□□□□ -0.58
CHD1-205ENST00000508756 RNF4P78317 190 aa11.39□□□□□ -0.59
CHD1-205ENST00000508756 ARID5AQ03989 594 aa11.39□□□□□ -0.59
CHD1-205ENST00000508756 NBPF11Q86T75 865 aa11.39□□□□□ -0.59
CHD1-205ENST00000508756 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.39□□□□□ -0.593e-7■■■■■ 35.2
CHD1-205ENST00000508756 ATP13A1Q9HD20 1204 aa11.39□□□□□ -0.59
CHD1-205ENST00000508756 KCNH3Q9ULD8 1083 aa11.39□□□□□ -0.59
CHD1-205ENST00000508756 MRVI1Q9Y6F6 885 aa11.39□□□□□ -0.59
CHD1-205ENST00000508756 WASH4PA8MWX3 477 aa11.38□□□□□ -0.59
CHD1-205ENST00000508756 FGRP09769 529 aa11.38□□□□□ -0.59
CHD1-205ENST00000508756 GP2P55259 537 aaKnown RBP11.38□□□□□ -0.59
CHD1-205ENST00000508756 NAALADL2Q58DX5 795 aa11.38□□□□□ -0.59
CHD1-205ENST00000508756 OR6P1Q8NGX9 317 aa11.38□□□□□ -0.59
CHD1-205ENST00000508756 ASB11Q8WXH4 323 aa11.38□□□□□ -0.59
CHD1-205ENST00000508756 UBE2FQ969M7 185 aa11.38□□□□□ -0.59
CHD1-205ENST00000508756 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
CHD1-205ENST00000508756 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHD1-205ENST00000508756 TTC6Q86TZ1 520 aa11.37□□□□□ -0.59
CHD1-205ENST00000508756 MCF2L2Q86YR7 1114 aa11.37□□□□□ -0.59
CHD1-205ENST00000508756 TP53INP2Q8IXH6 220 aa11.37□□□□□ -0.59
CHD1-205ENST00000508756 SLC43A3Q8NBI5 491 aa11.37□□□□□ -0.59
CHD1-205ENST00000508756 DUSP15Q9H1R2 295 aaPredicted RBP11.37□□□□□ -0.59
CHD1-205ENST00000508756 IKZF1Q13422 519 aa11.36□□□□□ -0.59
CHD1-205ENST00000508756 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
CHD1-205ENST00000508756 THAP5Q7Z6K1 395 aa11.36□□□□□ -0.59
CHD1-205ENST00000508756 MKRN2Q9H000 416 aaKnown RBP11.36□□□□□ -0.59
CHD1-205ENST00000508756 SUCOQ9UBS9 1254 aaKnown RBP11.36□□□□□ -0.59
CHD1-205ENST00000508756 OAS3Q9Y6K5 1087 aaKnown RBP11.36□□□□□ -0.59
CHD1-205ENST00000508756 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 A0A1W2PQH9 124 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 SHISA3A0PJX4 238 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 C9IYK1 514 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 SNW1Q13573 536 aaKnown RBP11.35□□□□□ -0.59
CHD1-205ENST00000508756 PPP2R5EQ16537 467 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 DHRS1Q96LJ7 313 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 GPR62Q9BZJ7 368 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 FAM86C1Q9NVL1 165 aa11.35□□□□□ -0.59
CHD1-205ENST00000508756 SRFP11831 508 aa11.34□□□□□ -0.59
CHD1-205ENST00000508756 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
CHD1-205ENST00000508756 NBPF9Q3BBW0 867 aa11.34□□□□□ -0.59
CHD1-205ENST00000508756 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
CHD1-205ENST00000508756 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
CHD1-205ENST00000508756 C19orf47Q8N9M1 422 aaKnown RBP11.34□□□□□ -0.59
CHD1-205ENST00000508756 GMLQ99445 158 aa11.33□□□□□ -0.6
CHD1-205ENST00000508756 GPATCH2Q9NW75 528 aa11.33□□□□□ -0.6
CHD1-205ENST00000508756 FUT4P22083 530 aa11.32□□□□□ -0.6
CHD1-205ENST00000508756 TPP2P29144 1249 aaPredicted RBP11.32□□□□□ -0.6
CHD1-205ENST00000508756 PLCL1Q15111 1095 aa11.32□□□□□ -0.6
CHD1-205ENST00000508756 TMC3Q7Z5M5 1100 aa11.32□□□□□ -0.6
CHD1-205ENST00000508756 TRIT1Q9H3H1 467 aaKnown RBP11.32□□□□□ -0.6
CHD1-205ENST00000508756 PRDM7Q9NQW5 492 aa11.32□□□□□ -0.6
CHD1-205ENST00000508756 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
CHD1-205ENST00000508756 TP53P04637 393 aaPredicted RBP11.31□□□□□ -0.6
CHD1-205ENST00000508756 ETFBP38117 255 aa11.31□□□□□ -0.6
CHD1-205ENST00000508756 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
CHD1-205ENST00000508756 CCDC144CPQ8IYA2 1237 aa11.31□□□□□ -0.6
CHD1-205ENST00000508756 AGBL5Q8NDL9 886 aa11.31□□□□□ -0.6
CHD1-205ENST00000508756 C8orf37Q96NL8 207 aa11.31□□□□□ -0.6
CHD1-205ENST00000508756 PRDM14Q9GZV8 571 aa11.31□□□□□ -0.6
CHD1-205ENST00000508756 CARS2Q9HA77 564 aaKnown RBP11.31□□□□□ -0.6
CHD1-205ENST00000508756 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
CHD1-205ENST00000508756 PCDHB10Q9UN67 800 aa11.31□□□□□ -0.6
CHD1-205ENST00000508756 CASP7P55210 303 aa11.3□□□□□ -0.6
CHD1-205ENST00000508756 ZP2Q05996 745 aa11.3□□□□□ -0.6
CHD1-205ENST00000508756 GAB4Q2WGN9 574 aa11.3□□□□□ -0.6
CHD1-205ENST00000508756 XP32Q5T750 250 aa11.3□□□□□ -0.6
CHD1-205ENST00000508756 TSPYL5Q86VY4 417 aaPredicted RBP11.3□□□□□ -0.6
CHD1-205ENST00000508756 ZNF408Q9H9D4 720 aa11.3□□□□□ -0.6
CHD1-205ENST00000508756 ESR1P03372 595 aa11.29□□□□□ -0.6
CHD1-205ENST00000508756 AUHQ13825 339 aaKnown RBP11.29□□□□□ -0.6
CHD1-205ENST00000508756 CLEC16AQ2KHT3 1053 aa11.29□□□□□ -0.6
CHD1-205ENST00000508756 AXDND1Q5T1B0 1012 aaPredicted RBP11.29□□□□□ -0.6
CHD1-205ENST00000508756 DCAF15Q66K64 600 aa11.29□□□□□ -0.6
CHD1-205ENST00000508756 ASCC2Q9H1I8 757 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms