RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ERO1BQ86YB8 467 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 ENAHQ8N8S7 591 aaPredicted RBP10.16□□□□□ -0.78
USP46-207ENST00000508499 NKX2-3Q8TAU0 364 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 CEP95Q96GE4 821 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 UBAC1Q9BSL1 405 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 SH2D4AQ9H788 454 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 SNCAIPQ9Y6H5 919 aa10.16□□□□□ -0.78
USP46-207ENST00000508499 THSD7BQ9C0I4 1608 aa10.15□□□□□ -0.78
USP46-207ENST00000508499 TNKSO95271 1327 aa10.15□□□□□ -0.78
USP46-207ENST00000508499 ERICH2A1L162 156 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 USP17L5A8MUK1 530 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 SH2B2O14492 632 aaPredicted RBP10.15□□□□□ -0.79
USP46-207ENST00000508499 GH2P01242 217 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 SLURP2P0DP57 97 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 ZBTB48P10074 688 aaPredicted RBP10.15□□□□□ -0.79
USP46-207ENST00000508499 MCM2P49736 904 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 EMP3P54852 163 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 JAG1P78504 1218 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 COL9A3Q14050 684 aaPredicted RBP10.15□□□□□ -0.79
USP46-207ENST00000508499 SH3D19Q5HYK7 790 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 FAM47AQ5JRC9 791 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 RRP12Q5JTH9 1297 aaKnown RBP10.15□□□□□ -0.79
USP46-207ENST00000508499 DLK2Q6UY11 383 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 SAPCD2Q86UD0 394 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 GMCL1P1Q8NEA9 526 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 C12orf42Q96LP6 360 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 KIAA1683Q9H0B3 1180 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 LY9Q9HBG7 655 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 AS3MTQ9HBK9 375 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 TOMM22Q9NS69 142 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 KCNH4Q9UQ05 1017 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 TMX2Q9Y320 296 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 CSADQ9Y600 493 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 TLL2Q9Y6L7 1015 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 RLFQ13129 1914 aa10.15□□□□□ -0.79
USP46-207ENST00000508499 TMEM88BA6NKF7 163 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 C19orf81C9J6K1 198 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 CXCL11O14625 94 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 GDF11O95390 407 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 SNHG28P0DPA3 235 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 TOP1P11387 765 aaKnown RBP10.14□□□□□ -0.79
USP46-207ENST00000508499 NEK4P51957 841 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 ICA1Q05084 483 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 PPIL2Q13356 520 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 TOB2Q14106 344 aaPredicted RBP10.14□□□□□ -0.79
USP46-207ENST00000508499 SEPT2Q15019 361 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 LPAR1Q92633 364 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 ZKSCAN4Q969J2 545 aaPredicted RBP10.14□□□□□ -0.79
USP46-207ENST00000508499 SNX21Q969T3 373 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 ZNF274Q96GC6 653 aaPredicted RBP10.14□□□□□ -0.79
USP46-207ENST00000508499 ARHGEF10LQ9HCE6 1279 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 PICK1Q9NRD5 415 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 AFG3L2Q9Y4W6 797 aa10.14□□□□□ -0.79
USP46-207ENST00000508499 IFIT3O14879 490 aaKnown RBP10.13□□□□□ -0.79
USP46-207ENST00000508499 CALM1P0DP23 149 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 CALM2P0DP24 149 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 CALM3P0DP25 149 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 EEF2P13639 858 aaKnown RBP10.13□□□□□ -0.79
USP46-207ENST00000508499 FMR1Q06787 632 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP46-207ENST00000508499 TROAPQ12815 778 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 WTAPQ15007 396 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 TMEM67Q5HYA8 995 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 IFIT1BQ5T764 474 aaKnown RBP10.13□□□□□ -0.79
USP46-207ENST00000508499 ZNF280CQ8ND82 737 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 UPF3BQ9BZI7 483 aaKnown RBP10.13□□□□□ -0.79
USP46-207ENST00000508499 PDRG1Q9NUG6 133 aa10.13□□□□□ -0.79
USP46-207ENST00000508499 A0A0G2JMZ2 1700 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 MYH6P13533 1939 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 RASSF10A6NK89 507 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 MPHOSPH10O00566 681 aaKnown RBP10.12□□□□□ -0.79
USP46-207ENST00000508499 NMT2O60551 498 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 PLA2G6O60733 806 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 DDAH1O94760 285 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 SMARCA1P28370 1054 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 APLP1P51693 650 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 USP14P54578 494 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 BACE1P56817 501 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 RAB3GAP1Q15042 981 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 APOA5Q6Q788 366 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 Q6ZUG5 572 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 STK11IPQ8N1F8 1099 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 CHMP4CQ96CF2 233 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 GMCL1Q96IK5 515 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 TMEM47Q9BQJ4 181 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 VCPKMTQ9H867 229 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 STX8Q9UNK0 236 aa10.12□□□□□ -0.79
USP46-207ENST00000508499 A0A0G2JLL6 359 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 TESPA1A2RU30 521 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 CPA1P15085 419 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 AK2P54819 239 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 SHROOM1Q2M3G4 852 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 PRRT2Q7Z6L0 340 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms