RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 LMBR1LQ6UX01 489 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 WAPLQ7Z5K2 1190 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 PARP9Q8IXQ6 854 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 RRP36Q96EU6 259 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 FAM227BQ96M60 508 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 FRMD4BQ9Y2L6 1034 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 CFAP73A6NFT4 308 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 ATP5HO75947 161 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 RNF8O76064 485 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 SESN3P58005 492 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 UAP1Q16222 522 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 PDCD2Q16342 344 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 ZSCAN29Q8IWY8 852 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 ST13P4Q8IZP2 240 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 CRACR2BQ8N4Y2 399 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 VAT1LQ9HCJ6 419 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 POLR3EQ9NVU0 708 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 AMOTL2Q9Y2J4 779 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 PPIP5K1Q6PFW1 1433 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 CTNND1O60716 968 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 HEXIM1O94992 359 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 BAG2O95816 211 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 TSPY3P0CV98 308 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 TSPY8P0CW00 308 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 CYP7A1P22680 504 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 CASP14P31944 242 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 GJC1P36383 396 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 COPB1P53618 953 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 DCAF17Q5H9S7 520 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 TOM1L2Q6ZVM7 507 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 KBTBD3Q8NAB2 608 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 RUBCNQ92622 972 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 BPIFA3Q9BQP9 254 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 C19orf44Q9H6X5 657 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 SHANK2Q9UPX8 1470 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 ELF1P32519 619 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 PHBP35232 272 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 LIN9Q5TKA1 542 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 TEX11Q8IYF3 940 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 NME8Q8N427 588 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 LRRC8CQ8TDW0 803 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 CDC5LQ99459 802 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 IMPG2Q9BZV3 1241 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 KLC4Q9NSK0 619 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 ATP5J2-PTCD1G3V325 749 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 OTUD7BQ6GQQ9 843 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 ARHGEF18Q6ZSZ5 1173 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 ENOX1Q8TC92 643 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 GSDMAQ96QA5 445 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 VIPAS39Q9H9C1 493 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 ARHGAP42A6NI28 874 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 CHL1O00533 1208 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 GTPBP6O43824 516 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 ITIH3Q06033 890 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 BIRC3Q13489 604 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 NBPF6Q5VWK0 638 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 NBPF4Q96M43 638 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 NSFL1CQ9UNZ2 370 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 PZPP20742 1482 aa8.06□□□□□ -1.12
UBE2D3-224ENST00000508474 ZWINTO95229 277 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 EEF1GP26641 437 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 CUL1Q13616 776 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 EIF4A2Q14240 407 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 DPCR1Q3MIW9 517 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 CCDC92Q53HC0 331 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 PPP1R21Q6ZMI0 780 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 APPBP2Q92624 585 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 SPDL1Q96EA4 605 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 PHACTR3Q96KR7 559 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 LSG1Q9H089 658 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 EPB41L5Q9HCM4 733 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 MAPK8IP1Q9UQF2 711 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 COMMD10Q9Y6G5 202 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 RASSF10A6NK89 507 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 RBL2Q08999 1139 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 SLC39A14Q15043 492 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 XAGE3Q8WTP9 111 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 RILPQ96NA2 401 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 MAP3K5Q99683 1374 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 SLFN14P0C7P3 912 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 GCFC2P16383 781 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 RXRAP19793 462 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 GYS2P54840 703 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 AKAP4Q5JQC9 854 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 ARHGEF25Q86VW2 580 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 NOSTRINQ8IVI9 506 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 THEMISQ8N1K5 641 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 ABTB1Q969K4 478 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 GFM2Q969S9 779 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 HVCN1Q96D96 273 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 CHAMP1Q96JM3 812 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 OSBPL9Q96SU4 736 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 KRT12Q99456 494 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 STX8Q9UNK0 236 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 UNC13AQ9UPW8 1703 aa8.05□□□□□ -1.12
UBE2D3-224ENST00000508474 E7EWF7 191 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms