RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 CAPS2Q9BXY5 557 aa14.32□□□□□ -0.12
DDR1-262ENST00000508312 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
DDR1-262ENST00000508312 CPDO75976 1380 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 NEBLO76041 1014 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 CIAO1O76071 339 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 METAP2P50579 478 aaKnown RBP eCLIP14.31□□□□□ -0.126e-6■■■■□ 24.8
DDR1-262ENST00000508312 RBL2Q08999 1139 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 RNF187Q5TA31 235 aaPredicted RBP14.31□□□□□ -0.12
DDR1-262ENST00000508312 VPS37DQ86XT2 251 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 POLD4Q9HCU8 107 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 RIC1Q4ADV7 1423 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 NDUFAB1O14561 156 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
DDR1-262ENST00000508312 WHAMMP3Q1A5X7 153 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
DDR1-262ENST00000508312 TUBE1Q9UJT0 475 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 MYO6Q9UM54 1294 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 ADAMTS7Q9UKP4 1686 aa14.31□□□□□ -0.12
DDR1-262ENST00000508312 MINDY4BA8MYZ0 360 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 TEX33O43247 280 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 FMR1Q06787 632 aaKnown RBP eCLIP14.3□□□□□ -0.123e-7■■■□□ 15.5
DDR1-262ENST00000508312 CEP57Q86XR8 500 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 CAGE1Q8TC20 777 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 ZNF274Q96GC6 653 aaPredicted RBP14.3□□□□□ -0.12
DDR1-262ENST00000508312 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
DDR1-262ENST00000508312 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 GOLGA6BA6NDN3 693 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 KCNQ2O43526 872 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 ZEB2O60315 1214 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 PDE8BO95263 885 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 ADD2P35612 726 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 STX17P56962 302 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 GRIN1Q05586 938 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 FKBP15Q5T1M5 1219 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
DDR1-262ENST00000508312 GPR108Q9NPR9 543 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 GUCA1BQ9UMX6 200 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
DDR1-262ENST00000508312 CSF1RP07333 972 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 TUBB4BP68371 445 aa14.3□□□□□ -0.12
DDR1-262ENST00000508312 NKX1-1Q15270 411 aaPredicted RBP14.3□□□□□ -0.12
DDR1-262ENST00000508312 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
DDR1-262ENST00000508312 MSL3Q8N5Y2 521 aaKnown RBP14.3□□□□□ -0.12
DDR1-262ENST00000508312 LMTK3Q96Q04 1460 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 TUBBP07437 444 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
DDR1-262ENST00000508312 TMEM67Q5HYA8 995 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 KRT40Q6A162 431 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 SHC4Q6S5L8 630 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
DDR1-262ENST00000508312 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 AGXT2Q9BYV1 514 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 HDAC6Q9UBN7 1215 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 MTMR7Q9Y216 660 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 RANBP6O60518 1105 aaKnown RBP14.29□□□□□ -0.12
DDR1-262ENST00000508312 SRGAP2O75044 1071 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 CASP1P29466 404 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 PPARDQ03181 441 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 ACTN3Q08043 901 aaPredicted RBP14.29□□□□□ -0.12
DDR1-262ENST00000508312 NEDD9Q14511 834 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 COG1Q8WTW3 980 aa14.29□□□□□ -0.12
DDR1-262ENST00000508312 BAZ2BQ9UIF8 2168 aaKnown RBP14.29□□□□□ -0.12
DDR1-262ENST00000508312 SSBP05455 408 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDR1-262ENST00000508312 BMP6P22004 513 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 CASP14P31944 242 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 ELF1P32519 619 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 GYG1P46976 350 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 JMYQ8N9B5 988 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 ZSWIM5Q9P217 1185 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 IFIT3O14879 490 aaKnown RBP14.28□□□□□ -0.12
DDR1-262ENST00000508312 C3orf67Q6ZVT6 689 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 PTF1AQ7RTS3 328 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 ADGRA1Q86SQ6 560 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.122e-7■■■□□ 17.5
DDR1-262ENST00000508312 NAPBQ9H115 298 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 KCNH3Q9ULD8 1083 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 LAMA4Q16363 1823 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 BTBD18B2RXH4 712 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 AARSP49588 968 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDR1-262ENST00000508312 TUBB2AQ13885 445 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 TMED8Q6PL24 325 aaPredicted RBP14.28□□□□□ -0.12
DDR1-262ENST00000508312 APOA5Q6Q788 366 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 VGLL2Q8N8G2 317 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 STAMQ92783 540 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 TUBB2BQ9BVA1 445 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 VEZTQ9HBM0 779 aa14.28□□□□□ -0.12
DDR1-262ENST00000508312 ANGEL1Q9UNK9 670 aaKnown RBP14.28□□□□□ -0.12
DDR1-262ENST00000508312 ATP1A2P50993 1020 aa14.27□□□□□ -0.12
DDR1-262ENST00000508312 PPFIA1Q13136 1202 aa14.27□□□□□ -0.12
DDR1-262ENST00000508312 SPATA5Q8NB90 893 aa14.27□□□□□ -0.12
DDR1-262ENST00000508312 RUFY1Q96T51 708 aa14.27□□□□□ -0.12
DDR1-262ENST00000508312 SELENOOQ9BVL4 669 aa14.27□□□□□ -0.12
DDR1-262ENST00000508312 VIPAS39Q9H9C1 493 aa14.27□□□□□ -0.12
DDR1-262ENST00000508312 ODF2LQ9ULJ1 636 aa14.27□□□□□ -0.12
DDR1-262ENST00000508312 FAM205CA6NFA0 338 aa14.27□□□□□ -0.13
DDR1-262ENST00000508312 NR5A1Q13285 461 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms