RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 IVNS1ABPQ9Y6Y0 642 aa8.29□□□□□ -1.08
TRAPPC13-209ENST00000508304 LRRN2O75325 713 aa8.28□□□□□ -1.08
TRAPPC13-209ENST00000508304 CHRNEQ04844 493 aa8.28□□□□□ -1.08
TRAPPC13-209ENST00000508304 SNX17Q15036 470 aa8.28□□□□□ -1.08
TRAPPC13-209ENST00000508304 TMEM201Q5SNT2 666 aa8.28□□□□□ -1.08
TRAPPC13-209ENST00000508304 SPPL2CQ8IUH8 684 aa8.28□□□□□ -1.08
TRAPPC13-209ENST00000508304 FAM13CQ8NE31 585 aa8.28□□□□□ -1.08
TRAPPC13-209ENST00000508304 RELTQ969Z4 430 aa8.28□□□□□ -1.08
TRAPPC13-209ENST00000508304 RBM47A0AV96 593 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 BMP7P18075 431 aa8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 TEKQ02763 1124 aa8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 ANKS4BQ8N8V4 417 aa8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 SYTL4Q96C24 671 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 KCNC2Q96PR1 638 aa8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 ZCCHC4Q9H5U6 513 aa8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 RNF19AQ9NV58 838 aa8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 ZNF281Q9Y2X9 895 aa8.27□□□□□ -1.09
TRAPPC13-209ENST00000508304 A0A0G2JLL6 359 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 RLBP1P12271 317 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 PLCG1P19174 1290 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 YARSP54577 528 aaKnown RBP8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 DUSP4Q13115 394 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 MEI1Q5TIA1 1274 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 SLFN12Q8IYM2 578 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 LINC01599Q8WXQ3 324 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 GPR160Q9UJ42 338 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
TRAPPC13-209ENST00000508304 SHISA3A0PJX4 238 aa8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 PSPNO60542 156 aa8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 PDE6BP35913 854 aa8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 ZNF385BQ569K4 471 aa8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 CCDC84Q86UT8 332 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 G6PC3Q9BUM1 346 aa8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 SGPP1Q9BX95 441 aa8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 KCTD3Q9Y597 815 aa8.25□□□□□ -1.09
TRAPPC13-209ENST00000508304 NOTOA8MTQ0 251 aa8.24□□□□□ -1.09
TRAPPC13-209ENST00000508304 TCERG1LQ5VWI1 586 aa8.24□□□□□ -1.09
TRAPPC13-209ENST00000508304 TMEM132EQ6IEE7 984 aa8.24□□□□□ -1.09
TRAPPC13-209ENST00000508304 KREMEN1Q96MU8 473 aa8.24□□□□□ -1.09
TRAPPC13-209ENST00000508304 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-209ENST00000508304 ASPNQ9BXN1 380 aa8.24□□□□□ -1.09
TRAPPC13-209ENST00000508304 CILPO75339 1184 aa8.23□□□□□ -1.09
TRAPPC13-209ENST00000508304 MARCH10Q8NA82 808 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-209ENST00000508304 PHC3Q8NDX5 983 aa8.23□□□□□ -1.09
TRAPPC13-209ENST00000508304 DUSP9Q99956 384 aaKnown RBP8.23□□□□□ -1.09
TRAPPC13-209ENST00000508304 PRR36Q9H6K5 1346 aa8.23□□□□□ -1.09
TRAPPC13-209ENST00000508304 FAM221AA4D161 298 aa8.22□□□□□ -1.09
TRAPPC13-209ENST00000508304 RFXAPO00287 272 aa8.22□□□□□ -1.09
TRAPPC13-209ENST00000508304 FOXD2O60548 495 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-209ENST00000508304 GALK1P51570 392 aa8.22□□□□□ -1.09
TRAPPC13-209ENST00000508304 KCNA1Q09470 495 aa8.22□□□□□ -1.09
TRAPPC13-209ENST00000508304 SSPNQ14714 243 aa8.22□□□□□ -1.09
TRAPPC13-209ENST00000508304 BNC2Q6ZN30 1099 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-209ENST00000508304 TRIM13O60858 407 aa8.21□□□□□ -1.1
TRAPPC13-209ENST00000508304 EFEMP2O95967 443 aa8.21□□□□□ -1.1
TRAPPC13-209ENST00000508304 ST13P50502 369 aaKnown RBP8.21□□□□□ -1.1
TRAPPC13-209ENST00000508304 NLRX1Q86UT6 975 aa8.21□□□□□ -1.1
TRAPPC13-209ENST00000508304 JAG2Q9Y219 1238 aa8.21□□□□□ -1.1
TRAPPC13-209ENST00000508304 OR14I1A6ND48 311 aa8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 HRKO00198 91 aa8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 SUPT5HO00267 1087 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 TNNI2P48788 182 aa8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 DIEXFQ68CQ4 756 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 TMEM151BQ8IW70 566 aa8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 VWCEQ96DN2 955 aa8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 CCDC74BQ96LY2 380 aa8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 MBD1Q9UIS9 605 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC13-209ENST00000508304 CHURC1-FNTBB4DL54 471 aa8.19□□□□□ -1.1
TRAPPC13-209ENST00000508304 BPNT1O95861 308 aa8.19□□□□□ -1.1
TRAPPC13-209ENST00000508304 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC13-209ENST00000508304 GATAD2BQ8WXI9 593 aa8.19□□□□□ -1.1
TRAPPC13-209ENST00000508304 RTEL1Q9NZ71 1219 aa8.19□□□□□ -1.1
TRAPPC13-209ENST00000508304 REV1Q9UBZ9 1251 aa8.19□□□□□ -1.1
TRAPPC13-209ENST00000508304 F13A1P00488 732 aa8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 PI3P19957 117 aa8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 LMNB2Q03252 620 aa8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 CAMK2GQ13555 558 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 CLEC16AQ2KHT3 1053 aa8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 ADGRF1Q5T601 910 aa8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 RNF111Q6ZNA4 994 aa8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 ENOX1Q8TC92 643 aaKnown RBP8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 SIGLEC10Q96LC7 697 aa8.18□□□□□ -1.1
TRAPPC13-209ENST00000508304 NFIXQ14938 502 aa8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 SIRT2Q8IXJ6 389 aa8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 USHBP1Q8N6Y0 703 aa8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 SYTL5Q8TDW5 730 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 PANK1Q8TE04 598 aa8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 HDAC8Q9BY41 377 aa8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 XYLT2Q9H1B5 865 aa8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 KLHL3Q9UH77 587 aa8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 POLR3KQ9Y2Y1 108 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC13-209ENST00000508304 NRDCO43847 1150 aa8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 DNAJA2O60884 412 aa8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 USP2O75604 605 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 SYN1P17600 705 aa8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 KIR2DL1P43626 348 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 KIR2DL2P43627 348 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 SRSF3P84103 164 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms