RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NMIQ13287 307 aaPredicted RBP23.64■■□□□ 1.37
SFXN1-209ENST00000508290 COG2Q14746 738 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 CCDC129Q6ZRS4 1044 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 CCAR1Q8IX12 1150 aaKnown RBP23.64■■□□□ 1.37
SFXN1-209ENST00000508290 PXYLP1Q8TE99 480 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 TMEM106CQ9BVX2 250 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 RBPJLQ9UBG7 517 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 FLT3LGP49771 235 aa23.63■■□□□ 1.37
SFXN1-209ENST00000508290 NT5C2P49902 561 aa23.63■■□□□ 1.37
SFXN1-209ENST00000508290 SOX10P56693 466 aa23.63■■□□□ 1.37
SFXN1-209ENST00000508290 MLLT1Q03111 559 aaPredicted RBP23.63■■□□□ 1.37
SFXN1-209ENST00000508290 MB21D1Q8N884 522 aa23.63■■□□□ 1.37
SFXN1-209ENST00000508290 SOCS4Q8WXH5 440 aa23.63■■□□□ 1.37
SFXN1-209ENST00000508290 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.63■■□□□ 1.37
SFXN1-209ENST00000508290 TANGO6Q9C0B7 1094 aa23.63■■□□□ 1.37
SFXN1-209ENST00000508290 FOXP2O15409 715 aa23.62■■□□□ 1.37
SFXN1-209ENST00000508290 PCP11498 1178 aaKnown RBP23.62■■□□□ 1.37
SFXN1-209ENST00000508290 UBXN2AP68543 259 aa23.62■■□□□ 1.37
SFXN1-209ENST00000508290 ATP2B2Q01814 1243 aa23.62■■□□□ 1.37
SFXN1-209ENST00000508290 HTTP42858 3142 aa23.62■■□□□ 1.37
SFXN1-209ENST00000508290 TSPY3P0CV98 308 aa23.61■■□□□ 1.37
SFXN1-209ENST00000508290 TSPY8P0CW00 308 aa23.61■■□□□ 1.37
SFXN1-209ENST00000508290 TTC22Q5TAA0 569 aa23.61■■□□□ 1.37
SFXN1-209ENST00000508290 VPS53Q5VIR6 699 aa23.61■■□□□ 1.37
SFXN1-209ENST00000508290 NEDD1Q8NHV4 660 aa23.61■■□□□ 1.37
SFXN1-209ENST00000508290 TXNRD2Q9NNW7 524 aa23.61■■□□□ 1.37
SFXN1-209ENST00000508290 IGKV6D-41A0A0C4DH26 115 aa23.6■■□□□ 1.37
SFXN1-209ENST00000508290 SPDYE16A6NNV3 312 aaPredicted RBP23.6■■□□□ 1.37
SFXN1-209ENST00000508290 ECM2O94769 699 aaPredicted RBP23.6■■□□□ 1.37
SFXN1-209ENST00000508290 HSPD1P10809 573 aaKnown RBP23.6■■□□□ 1.37
SFXN1-209ENST00000508290 CAPN2P17655 700 aa23.6■■□□□ 1.37
SFXN1-209ENST00000508290 PDE4AP27815 886 aa23.6■■□□□ 1.37
SFXN1-209ENST00000508290 CLEC10AQ8IUN9 316 aa23.6■■□□□ 1.37
SFXN1-209ENST00000508290 MKL1Q969V6 931 aa23.6■■□□□ 1.37
SFXN1-209ENST00000508290 PAGR1Q9BTK6 254 aa23.6■■□□□ 1.37
SFXN1-209ENST00000508290 GREB1LQ9C091 1923 aaPredicted RBP23.6■■□□□ 1.37
SFXN1-209ENST00000508290 ZSWIM8A7E2V4 1837 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 ADCY3O60266 1144 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 PRDM1O75626 825 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 TTLL1O95922 423 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 FGAP02671 866 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 STK11IPQ8N1F8 1099 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 SH3TC2Q8TF17 1288 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 MTMR4Q9NYA4 1195 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 GABRQQ9UN88 632 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.59■■□□□ 1.37
SFXN1-209ENST00000508290 MGAMO43451 1857 aa23.59■■□□□ 1.37
SFXN1-209ENST00000508290 ORC4O43929 436 aa23.58■■□□□ 1.37
SFXN1-209ENST00000508290 FLOT1O75955 427 aa23.58■■□□□ 1.37
SFXN1-209ENST00000508290 FGRP09769 529 aa23.58■■□□□ 1.37
SFXN1-209ENST00000508290 ZNF589Q86UQ0 364 aaPredicted RBP23.58■■□□□ 1.37
SFXN1-209ENST00000508290 TRMT44Q8IYL2 757 aaKnown RBP23.58■■□□□ 1.37
SFXN1-209ENST00000508290 NUDT12Q9BQG2 462 aa23.58■■□□□ 1.37
SFXN1-209ENST00000508290 CWC22Q9HCG8 908 aaKnown RBP23.58■■□□□ 1.37
SFXN1-209ENST00000508290 XRCC5P13010 732 aaKnown RBP23.57■■□□□ 1.36
SFXN1-209ENST00000508290 DSG3P32926 999 aa23.57■■□□□ 1.36
SFXN1-209ENST00000508290 TFAP4Q01664 338 aa23.57■■□□□ 1.36
SFXN1-209ENST00000508290 CWC27Q6UX04 472 aaKnown RBP23.57■■□□□ 1.36
SFXN1-209ENST00000508290 CENPQQ7L2Z9 268 aaPredicted RBP23.57■■□□□ 1.36
SFXN1-209ENST00000508290 SPICE1Q8N0Z3 855 aa23.57■■□□□ 1.36
SFXN1-209ENST00000508290 CEP95Q96GE4 821 aa23.57■■□□□ 1.36
SFXN1-209ENST00000508290 RNF41Q9H4P4 317 aaPredicted RBP23.57■■□□□ 1.36
SFXN1-209ENST00000508290 BIN2Q9UBW5 565 aaPredicted RBP23.57■■□□□ 1.36
SFXN1-209ENST00000508290 RAD50Q92878 1312 aa23.57■■□□□ 1.36
SFXN1-209ENST00000508290 RBBP6Q7Z6E9 1792 aaKnown RBP23.56■■□□□ 1.36
SFXN1-209ENST00000508290 TSPY2A6NKD2 308 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 PLEKHH3Q7Z736 793 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 GMCL1P1Q8NEA9 526 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 SHCBP1Q8NEM2 672 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 NKX2-3Q8TAU0 364 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 RUFY2Q8WXA3 655 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 CLIP2Q9UDT6 1046 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 GJD2Q9UKL4 321 aa23.56■■□□□ 1.36
SFXN1-209ENST00000508290 F5H6K3 240 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 CNMDO75829 334 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 KLRC3Q07444 240 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 Q3C1V9 767 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 KIAA1755Q5JYT7 1200 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 POTEEQ6S8J3 1075 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 GPR142Q7Z601 462 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 DSCC1Q9BVC3 393 aa23.55■■□□□ 1.36
SFXN1-209ENST00000508290 GSPT1P15170 499 aaKnown RBP23.54■■□□□ 1.36
SFXN1-209ENST00000508290 COPB2P35606 906 aa23.54■■□□□ 1.36
SFXN1-209ENST00000508290 PORCNQ9H237 461 aa23.54■■□□□ 1.36
SFXN1-209ENST00000508290 BTBD7Q9P203 1132 aa23.54■■□□□ 1.36
SFXN1-209ENST00000508290 CTNNA3Q9UI47 895 aa23.54■■□□□ 1.36
SFXN1-209ENST00000508290 IVNS1ABPQ9Y6Y0 642 aa23.54■■□□□ 1.36
SFXN1-209ENST00000508290 STRNO43815 780 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 RAD21O60216 631 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 NDUFB10O96000 172 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 HMGCRP04035 888 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 RGS2P41220 211 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 CTDSPL2Q05D32 466 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 SPATC1LQ9H0A9 340 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 MROH8Q9H579 483 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 PPP1R9AQ9ULJ8 1098 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 ADAMTS5Q9UNA0 930 aa23.53■■□□□ 1.36
SFXN1-209ENST00000508290 SLC15A5A6NIM6 579 aa23.52■■□□□ 1.36
SFXN1-209ENST00000508290 ZNF213O14771 459 aa23.52■■□□□ 1.36
SFXN1-209ENST00000508290 RANBP6O60518 1105 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms