RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ZFYP08048 801 aaPredicted RBP17.13■□□□□ 0.33
RAB28-205ENST00000508274 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
RAB28-205ENST00000508274 SOCS4Q8WXH5 440 aa17.13■□□□□ 0.33
RAB28-205ENST00000508274 SEC62Q99442 399 aaKnown RBP17.13■□□□□ 0.33
RAB28-205ENST00000508274 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
RAB28-205ENST00000508274 CEP290O15078 2479 aa17.13■□□□□ 0.33
RAB28-205ENST00000508274 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
RAB28-205ENST00000508274 LBX2Q6XYB7 198 aa17.12■□□□□ 0.33
RAB28-205ENST00000508274 PLEKHH3Q7Z736 793 aa17.12■□□□□ 0.33
RAB28-205ENST00000508274 CCAR1Q8IX12 1150 aaKnown RBP17.12■□□□□ 0.33
RAB28-205ENST00000508274 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
RAB28-205ENST00000508274 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.12■□□□□ 0.33
RAB28-205ENST00000508274 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
RAB28-205ENST00000508274 TMX2Q9Y320 296 aa17.12■□□□□ 0.33
RAB28-205ENST00000508274 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
RAB28-205ENST00000508274 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
RAB28-205ENST00000508274 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 MORN1Q5T089 497 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 USP6NLQ92738 828 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 FSD1Q9BTV5 496 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 ROBO3Q96MS0 1386 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 FARP2O94887 1054 aaPredicted RBP17.11■□□□□ 0.33
RAB28-205ENST00000508274 EEF2P13639 858 aaKnown RBP17.11■□□□□ 0.33
RAB28-205ENST00000508274 ATP2B2Q01814 1243 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 HDAC1Q13547 482 aaPredicted RBP17.11■□□□□ 0.33
RAB28-205ENST00000508274 CCL14Q16627 93 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAB28-205ENST00000508274 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
RAB28-205ENST00000508274 CWC22Q9HCG8 908 aaKnown RBP17.11■□□□□ 0.33
RAB28-205ENST00000508274 U3KPZ7 1027 aaPredicted RBP17.11■□□□□ 0.33
RAB28-205ENST00000508274 MYH4Q9Y623 1939 aa17.1■□□□□ 0.33
RAB28-205ENST00000508274 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
RAB28-205ENST00000508274 XRCC5P13010 732 aaKnown RBP17.1■□□□□ 0.33
RAB28-205ENST00000508274 RASA1P20936 1047 aa17.1■□□□□ 0.33
RAB28-205ENST00000508274 CCNA1P78396 465 aa17.1■□□□□ 0.33
RAB28-205ENST00000508274 GIMAP6Q6P9H5 292 aa17.1■□□□□ 0.33
RAB28-205ENST00000508274 CRISPLD2Q9H0B8 497 aa17.1■□□□□ 0.33
RAB28-205ENST00000508274 ALPK3Q96L96 1907 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 RPTORQ8N122 1335 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 SLC34A2O95436 690 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
RAB28-205ENST00000508274 RGS2P41220 211 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 TDO2P48775 406 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 COG2Q14746 738 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
RAB28-205ENST00000508274 LPAR1Q92633 364 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 APBA2Q99767 749 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
RAB28-205ENST00000508274 HMX1Q9NP08 348 aaPredicted RBP17.09■□□□□ 0.33
RAB28-205ENST00000508274 APPP05067 770 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 ZKSCAN1P17029 563 aaPredicted RBP17.08■□□□□ 0.32
RAB28-205ENST00000508274 GNAT2P19087 354 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 MAP2K5Q13163 448 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 LRRFIP1Q32MZ4 808 aaKnown RBP17.08■□□□□ 0.32
RAB28-205ENST00000508274 ZMYM1Q5SVZ6 1142 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 MAP3K21Q5TCX8 1036 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 DIS3LQ8TF46 1054 aaKnown RBP17.08■□□□□ 0.32
RAB28-205ENST00000508274 ATG4CQ96DT6 458 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.32
RAB28-205ENST00000508274 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
RAB28-205ENST00000508274 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.32
RAB28-205ENST00000508274 FRMPD3Q5JV73 1810 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 PATL2C9JE40 543 aaKnown RBP17.07■□□□□ 0.32
RAB28-205ENST00000508274 H0YGN5 161 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 WDR46O15213 610 aaKnown RBP17.07■□□□□ 0.32
RAB28-205ENST00000508274 RAD21O60216 631 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 PRDM1O75626 825 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 FLOT1O75955 427 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 PTPREP23469 700 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 DSG3P32926 999 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 CACNB2Q08289 660 aaPredicted RBP17.07■□□□□ 0.32
RAB28-205ENST00000508274 IFNL3Q8IZI9 196 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 DPF3Q92784 378 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 MOV10L1Q9BXT6 1211 aaKnown RBP17.07■□□□□ 0.32
RAB28-205ENST00000508274 MKNK2Q9HBH9 465 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 HOXC10Q9NYD6 342 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 FLRT1Q9NZU1 646 aa17.07■□□□□ 0.32
RAB28-205ENST00000508274 PDE1AP54750 535 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 GRB14Q14449 540 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 LNPKQ9C0E8 428 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 SPATC1LQ9H0A9 340 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 FBXO28Q9NVF7 368 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 DNAH12Q6ZR08 3092 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 FOXP2O15409 715 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 CCND3P30281 292 aaPredicted RBP17.06■□□□□ 0.32
RAB28-205ENST00000508274 EXOC6Q8TAG9 804 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 NPLOC4Q8TAT6 608 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 IVNS1ABPQ9Y6Y0 642 aa17.06■□□□□ 0.32
RAB28-205ENST00000508274 SLC15A5A6NIM6 579 aa17.05■□□□□ 0.32
RAB28-205ENST00000508274 PLS1Q14651 629 aa17.05■□□□□ 0.32
RAB28-205ENST00000508274 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
RAB28-205ENST00000508274 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
RAB28-205ENST00000508274 HTATIP2Q9BUP3 242 aa17.05■□□□□ 0.32
RAB28-205ENST00000508274 ZNFX1Q9P2E3 1918 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms