RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 ABCC4O15439 1325 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 KHNYNO15037 678 aaKnown RBP9.67□□□□□ -0.86
CCDC149-206ENST00000508236 CILPO75339 1184 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 LTKP29376 864 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 LAMC2Q13753 1193 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
CCDC149-206ENST00000508236 TWISTNBQ3B726 338 aaPredicted RBP9.67□□□□□ -0.86
CCDC149-206ENST00000508236 C2orf27AQ580R0 203 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 KANK3Q6NY19 840 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 GK5Q6ZS86 529 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 REC114Q7Z4M0 266 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 GCC1Q96CN9 775 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 NSUN5Q96P11 429 aaKnown RBP9.67□□□□□ -0.86
CCDC149-206ENST00000508236 THUMPD2Q9BTF0 503 aaKnown RBP9.67□□□□□ -0.86
CCDC149-206ENST00000508236 EFCC1Q9HA90 598 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 PCDHGC4Q9Y5F7 938 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 PEAK1Q9H792 1746 aa9.67□□□□□ -0.86
CCDC149-206ENST00000508236 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 RGPD8O14715 1765 aaPredicted RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 DCDC2BA2VCK2 349 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 MASP1P48740 699 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 ZNF157P51786 506 aaPredicted RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 CASP7P55210 303 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 CLCQ05315 142 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 EIF4A2Q14240 407 aaKnown RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 MTERF2Q49AM1 385 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 RASIP1Q5U651 963 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 DHX32Q7L7V1 743 aaKnown RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 LSRQ86X29 649 aaPredicted RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 TSPYL6Q8N831 410 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 THAP3Q8WTV1 239 aaPredicted RBP9.66□□□□□ -0.86
CCDC149-206ENST00000508236 STAG1Q8WVM7 1258 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 CYP8B1Q9UNU6 501 aa9.66□□□□□ -0.86
CCDC149-206ENST00000508236 SSH2Q76I76 1423 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 KIAA0232Q92628 1395 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 BMP6P22004 513 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 TNP2Q05952 138 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 CHD1LQ86WJ1 897 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 C8orf58Q8NAV2 365 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 CHPF2Q9P2E5 772 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 SUGT1Q9Y2Z0 365 aa9.65□□□□□ -0.86
CCDC149-206ENST00000508236 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.87
CCDC149-206ENST00000508236 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 ARHGEF10O15013 1369 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 CHL1O00533 1208 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 GJB6O95452 261 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 BPNT1O95861 308 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 NRLP54845 237 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 SPEM2Q0P670 501 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 SCARF1Q14162 830 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 PPP2R5EQ16537 467 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 TKFCQ3LXA3 575 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 SULT6B1Q6IMI4 303 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 BHMTQ93088 406 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 C22orf23Q9BZE7 217 aa9.64□□□□□ -0.87
CCDC149-206ENST00000508236 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC149-206ENST00000508236 NAP1L2Q9ULW6 460 aaPredicted RBP9.64□□□□□ -0.87
CCDC149-206ENST00000508236 CACNA1FO60840 1977 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 S100BP04271 92 aaPredicted RBP9.63□□□□□ -0.87
CCDC149-206ENST00000508236 MAPTP10636 758 aaKnown RBP9.63□□□□□ -0.87
CCDC149-206ENST00000508236 NME2P22392 152 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 PRR20EP86478 221 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 PRR20CP86479 221 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 PRR20DP86480 221 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 PRR20BP86481 221 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 PRR20AP86496 221 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 INTS3Q68E01 1043 aaKnown RBP9.63□□□□□ -0.87
CCDC149-206ENST00000508236 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
CCDC149-206ENST00000508236 PBX4Q9BYU1 374 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 MUC3BQ9H195 1237 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 RASSF4Q9H2L5 321 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 MARK1Q9P0L2 795 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
CCDC149-206ENST00000508236 FAM83GA6ND36 823 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 ELL2O00472 640 aaPredicted RBP9.62□□□□□ -0.87
CCDC149-206ENST00000508236 DDAH1O94760 285 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 PDGFRBP09619 1106 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 LRRC14Q15048 493 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 TCEA2Q15560 299 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 BMP2KLQ5H9B9 411 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 SLC26A8Q96RN1 970 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 CLEC4MQ9H2X3 399 aaPredicted RBP9.62□□□□□ -0.87
CCDC149-206ENST00000508236 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
CCDC149-206ENST00000508236 PFDN2Q9UHV9 154 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 FLT4P35916 1363 aa9.62□□□□□ -0.87
CCDC149-206ENST00000508236 PTPRCP08575 1304 aa9.61□□□□□ -0.87
CCDC149-206ENST00000508236 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
CCDC149-206ENST00000508236 GOLGA6L3A6NEY3 463 aa9.61□□□□□ -0.87
CCDC149-206ENST00000508236 FRAT2O75474 233 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms