RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 USP17L20D6RJB6 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 CYP2C8P10632 490 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 GCLCP48506 637 aaPredicted RBP17.72■□□□□ 0.43
RNF4-210ENST00000508235 SP3Q02447 781 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 USP17L24Q0WX57 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 DGKZQ13574 1117 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 MKL1Q969V6 931 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 ERO1AQ96HE7 468 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 ASCC2Q9H1I8 757 aaPredicted RBP17.72■□□□□ 0.43
RNF4-210ENST00000508235 R3HDMLQ9H3Y0 253 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 TCP11L1Q9NUJ3 509 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 CLIP2Q9UDT6 1046 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 TRDNQ13061 729 aa17.71■□□□□ 0.43
RNF4-210ENST00000508235 KIF22Q14807 665 aa17.71■□□□□ 0.43
RNF4-210ENST00000508235 ARHGEF6Q15052 776 aa17.71■□□□□ 0.43
RNF4-210ENST00000508235 CCDC178Q5BJE1 867 aa17.71■□□□□ 0.43
RNF4-210ENST00000508235 LSG1Q9H089 658 aaKnown RBP17.71■□□□□ 0.43
RNF4-210ENST00000508235 RBM8AQ9Y5S9 174 aaKnown RBP17.71■□□□□ 0.43
RNF4-210ENST00000508235 TACC3Q9Y6A5 838 aa17.71■□□□□ 0.43
RNF4-210ENST00000508235 ADGRA2Q96PE1 1338 aa17.71■□□□□ 0.42
RNF4-210ENST00000508235 WDR46O15213 610 aaKnown RBP17.7■□□□□ 0.42
RNF4-210ENST00000508235 CYP21A2P08686 494 aa17.7■□□□□ 0.42
RNF4-210ENST00000508235 C17orf99Q6UX52 265 aa17.7■□□□□ 0.42
RNF4-210ENST00000508235 CATSPERGQ6ZRH7 1159 aa17.7■□□□□ 0.42
RNF4-210ENST00000508235 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
RNF4-210ENST00000508235 RPAP3Q9H6T3 665 aaPredicted RBP17.7■□□□□ 0.42
RNF4-210ENST00000508235 STX8Q9UNK0 236 aa17.7■□□□□ 0.42
RNF4-210ENST00000508235 NEDD4P46934 1319 aa17.7■□□□□ 0.42
RNF4-210ENST00000508235 RAD21O60216 631 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 REC8O95072 547 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 GMCL1P1Q8NEA9 526 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 TTC14Q96N46 770 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 TANGO6Q9C0B7 1094 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 IL17RBQ9NRM6 502 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 CPA4Q9UI42 421 aa17.69■□□□□ 0.42
RNF4-210ENST00000508235 F5H6K3 240 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 KDM4AO75164 1064 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 NOVP48745 357 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 HERVK_113P62684 666 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 KLRC3Q07444 240 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 COG2Q14746 738 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 FAM110CQ1W6H9 321 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 RALYLQ86SE5 291 aaKnown RBP17.68■□□□□ 0.42
RNF4-210ENST00000508235 SPICE1Q8N0Z3 855 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 HOXC10Q9NYD6 342 aa17.68■□□□□ 0.42
RNF4-210ENST00000508235 B4E1Z4 1266 aa17.67■□□□□ 0.42
RNF4-210ENST00000508235 NMT2O60551 498 aa17.67■□□□□ 0.42
RNF4-210ENST00000508235 BCRP11274 1271 aa17.67■□□□□ 0.42
RNF4-210ENST00000508235 LACTBP83111 547 aaPredicted RBP17.67■□□□□ 0.42
RNF4-210ENST00000508235 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
RNF4-210ENST00000508235 NCOA7Q8NI08 942 aa17.67■□□□□ 0.42
RNF4-210ENST00000508235 MYPNQ86TC9 1320 aa17.67■□□□□ 0.42
RNF4-210ENST00000508235 PCNTO95613 3336 aa17.67■□□□□ 0.42
RNF4-210ENST00000508235 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
RNF4-210ENST00000508235 GNRH1P01148 92 aa17.66■□□□□ 0.42
RNF4-210ENST00000508235 NECTIN1Q15223 517 aa17.66■□□□□ 0.42
RNF4-210ENST00000508235 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
RNF4-210ENST00000508235 KIAA1755Q5JYT7 1200 aa17.66■□□□□ 0.42
RNF4-210ENST00000508235 LBX2Q6XYB7 198 aa17.66■□□□□ 0.42
RNF4-210ENST00000508235 CTU1Q7Z7A3 348 aaKnown RBP17.66■□□□□ 0.42
RNF4-210ENST00000508235 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
RNF4-210ENST00000508235 LRRC47Q8N1G4 583 aaKnown RBP17.66■□□□□ 0.42
RNF4-210ENST00000508235 P2RX7Q99572 595 aaKnown RBP17.66■□□□□ 0.42
RNF4-210ENST00000508235 UBAC1Q9BSL1 405 aa17.66■□□□□ 0.42
RNF4-210ENST00000508235 ZSWIM5Q9P217 1185 aa17.66■□□□□ 0.42
RNF4-210ENST00000508235 PARP14Q460N5 1801 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 MGAMO43451 1857 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 E7EWF7 191 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
RNF4-210ENST00000508235 FLOT1O75955 427 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 NDUFB10O96000 172 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 TOP1P11387 765 aaKnown RBP17.65■□□□□ 0.42
RNF4-210ENST00000508235 CREB3L3Q68CJ9 461 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 SLFN13Q68D06 897 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 CD99L2Q8TCZ2 262 aa17.65■□□□□ 0.42
RNF4-210ENST00000508235 ZSCAN10Q96SZ4 725 aaPredicted RBP17.65■□□□□ 0.42
RNF4-210ENST00000508235 SLC27A2O14975 620 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 ZKSCAN1P17029 563 aaPredicted RBP17.64■□□□□ 0.41
RNF4-210ENST00000508235 SLC1A4P43007 532 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 FCGRTP55899 365 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 SART3Q15020 963 aaKnown RBP17.64■□□□□ 0.41
RNF4-210ENST00000508235 FAM83BQ5T0W9 1011 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 COL13A1Q5TAT6 717 aaPredicted RBP17.64■□□□□ 0.41
RNF4-210ENST00000508235 MB21D1Q8N884 522 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 GPRC5AQ8NFJ5 357 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 GMCL1Q96IK5 515 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 EFCC1Q9HA90 598 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 MORF4L1Q9UBU8 362 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 RABGAP1Q9Y3P9 1069 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 RLFQ13129 1914 aa17.64■□□□□ 0.41
RNF4-210ENST00000508235 ERICH2A1L162 156 aa17.63■□□□□ 0.41
RNF4-210ENST00000508235 SPDYE16A6NNV3 312 aaPredicted RBP17.63■□□□□ 0.41
RNF4-210ENST00000508235 HOXD10P28358 340 aa17.63■□□□□ 0.41
RNF4-210ENST00000508235 DSG3P32926 999 aa17.63■□□□□ 0.41
RNF4-210ENST00000508235 CCNA1P78396 465 aa17.63■□□□□ 0.41
RNF4-210ENST00000508235 ANKS1AQ92625 1134 aa17.63■□□□□ 0.41
RNF4-210ENST00000508235 TMEM47Q9BQJ4 181 aa17.63■□□□□ 0.41
RNF4-210ENST00000508235 ZKSCAN3Q9BRR0 538 aa17.63■□□□□ 0.41
RNF4-210ENST00000508235 FEM1BQ9UK73 627 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms