RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TAOK2Q9UL54 1235 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 FAM205CA6NFA0 338 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 GRIN1Q05586 938 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 METTL16Q86W50 562 aaKnown RBP20.25■□□□□ 0.83
SFXN1-208ENST00000507823 FAM13BQ9NYF5 915 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 RIMBP2O15034 1052 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 SLC35G1Q2M3R5 365 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 LONRF3Q496Y0 759 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 EYA3Q99504 573 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 TRIM5Q9C035 493 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 A0A087WWV3 80 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 CALML3P27482 149 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 FKBP1AP62942 108 aaKnown RBP20.24■□□□□ 0.83
SFXN1-208ENST00000507823 HHIPL2Q6UWX4 724 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 STAG2Q8N3U4 1231 aa20.24■□□□□ 0.83
SFXN1-208ENST00000507823 BAZ2BQ9UIF8 2168 aaKnown RBP20.24■□□□□ 0.83
SFXN1-208ENST00000507823 KIAA2012Q0VF49 1180 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 DAGLBQ8NCG7 672 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 FERMT2Q96AC1 680 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 BECN2A8MW95 431 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 NT5DC1Q5TFE4 455 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 OLFM4Q6UX06 510 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 MRIQ9BWK5 157 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 KCNF1Q9H3M0 494 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 TTC12Q9H892 705 aaPredicted RBP20.23■□□□□ 0.83
SFXN1-208ENST00000507823 M0R2N6 131 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 VEGFAP15692 232 aaPredicted RBP20.23■□□□□ 0.83
SFXN1-208ENST00000507823 GALNT17Q6IS24 598 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 SPZ1Q9BXG8 430 aa20.23■□□□□ 0.83
SFXN1-208ENST00000507823 IKBKBO14920 756 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
SFXN1-208ENST00000507823 PODNQ7Z5L7 613 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 AOPEPQ8N6M6 819 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 CYTH3O43739 400 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 NLRP5P59047 1200 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 ATP2C1P98194 919 aaPredicted RBP20.22■□□□□ 0.83
SFXN1-208ENST00000507823 NCAPHQ15003 741 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 ZRSR1Q15695 479 aaKnown RBP20.22■□□□□ 0.83
SFXN1-208ENST00000507823 TTC38Q5R3I4 469 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
SFXN1-208ENST00000507823 CNNM3Q8NE01 707 aa20.22■□□□□ 0.83
SFXN1-208ENST00000507823 GREB1LQ9C091 1923 aaPredicted RBP20.21■□□□□ 0.83
SFXN1-208ENST00000507823 TOP1P11387 765 aaKnown RBP20.21■□□□□ 0.83
SFXN1-208ENST00000507823 CSRNP2Q9H175 543 aa20.21■□□□□ 0.83
SFXN1-208ENST00000507823 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
SFXN1-208ENST00000507823 SLX4Q8IY92 1834 aa20.21■□□□□ 0.83
SFXN1-208ENST00000507823 IGKV6D-41A0A0C4DH26 115 aa20.21■□□□□ 0.83
SFXN1-208ENST00000507823 WNT7AO00755 349 aa20.21■□□□□ 0.83
SFXN1-208ENST00000507823 ZNF830Q96NB3 372 aaPredicted RBP20.21■□□□□ 0.83
SFXN1-208ENST00000507823 SPTLC3Q9NUV7 552 aa20.21■□□□□ 0.83
SFXN1-208ENST00000507823 HOOK1Q9UJC3 728 aaKnown RBP20.21■□□□□ 0.83
SFXN1-208ENST00000507823 PCDHA4Q9UN74 947 aa20.21■□□□□ 0.83
SFXN1-208ENST00000507823 TTF2Q9UNY4 1162 aaKnown RBP20.21■□□□□ 0.83
SFXN1-208ENST00000507823 ADAMTSL1Q8N6G6 1762 aa20.2■□□□□ 0.82
SFXN1-208ENST00000507823 ACTN4O43707 911 aaKnown RBP20.2■□□□□ 0.82
SFXN1-208ENST00000507823 SARSP49591 514 aaKnown RBP20.2■□□□□ 0.82
SFXN1-208ENST00000507823 PNOCQ13519 176 aa20.2■□□□□ 0.82
SFXN1-208ENST00000507823 NOM1Q5C9Z4 860 aaKnown RBP20.2■□□□□ 0.82
SFXN1-208ENST00000507823 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
SFXN1-208ENST00000507823 C2CD5Q86YS7 1000 aa20.2■□□□□ 0.82
SFXN1-208ENST00000507823 BLIDQ8IZY5 108 aa20.2■□□□□ 0.82
SFXN1-208ENST00000507823 SPC24Q8NBT2 197 aa20.2■□□□□ 0.82
SFXN1-208ENST00000507823 SPATA20Q8TB22 786 aa20.2■□□□□ 0.82
SFXN1-208ENST00000507823 MYH8P13535 1937 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 SMTNL1A8MU46 457 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 DDX4Q9NQI0 724 aaKnown RBP20.19■□□□□ 0.82
SFXN1-208ENST00000507823 BARHL2Q9NY43 387 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 STX8Q9UNK0 236 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 DOK7Q18PE1 504 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 APOBEC3HQ6NTF7 200 aaKnown RBP20.19■□□□□ 0.82
SFXN1-208ENST00000507823 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 KIAA1524Q8TCG1 905 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 CEP95Q96GE4 821 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 SWAP70Q9UH65 585 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 PCDHA5Q9Y5H7 936 aa20.19■□□□□ 0.82
SFXN1-208ENST00000507823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.18■□□□□ 0.82
SFXN1-208ENST00000507823 POLR2DO15514 142 aaKnown RBP20.18■□□□□ 0.82
SFXN1-208ENST00000507823 HDLBPQ00341 1268 aaKnown RBP20.18■□□□□ 0.82
SFXN1-208ENST00000507823 TYW1BQ6NUM6 668 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 H0YIN7 160 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 STXBP3O00186 592 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 BIN1O00499 593 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 ADAMTS3O15072 1205 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 POSTNQ15063 836 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 WWC2Q6AWC2 1192 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 C7orf43Q8WVR3 580 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 CLIP2Q9UDT6 1046 aa20.18■□□□□ 0.82
SFXN1-208ENST00000507823 SCN9AQ15858 1988 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 ATP2B1P20020 1258 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 TERF1P54274 439 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 STRIP1Q5VSL9 837 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 CDC42EP5Q6NZY7 148 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 USP49Q70CQ1 688 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 SH3RF1Q7Z6J0 888 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 TRIML1Q8N9V2 468 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms