RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 GJC2Q5T442 439 aaPredicted RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 EDC3Q96F86 508 aaKnown RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 GUCD1Q96NT3 240 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 WDR18Q9BV38 432 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 API5Q9BZZ5 524 aaKnown RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 DNAJC18Q9H819 358 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 FLRT1Q9NZU1 646 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 ZBTB21Q9ULJ3 1066 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 CUL9Q8IWT3 2517 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 MAST2Q6P0Q8 1798 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 FLT1P17948 1338 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 COL2A1P02458 1487 aaPredicted RBP7.06□□□□□ -1.28
GYPB-208ENST00000507009 MYH1P12882 1939 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 GNAI3P08754 354 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 UQCRFS1P1P0C7P4 283 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 HOXA7P31268 230 aaPredicted RBP7.06□□□□□ -1.28
GYPB-208ENST00000507009 USP5P45974 858 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 RTP1P59025 263 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 MORN1Q5T089 497 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 USP17L2Q6R6M4 530 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 ADGRA1Q86SQ6 560 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 MIGA1Q8NAN2 632 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 MAFAQ8NHW3 353 aaPredicted RBP7.06□□□□□ -1.28
GYPB-208ENST00000507009 NPLOC4Q8TAT6 608 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 MYLIPQ8WY64 445 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 FERMT2Q96AC1 680 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 BCL11AQ9H165 835 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 DHX36Q9H2U1 1008 aaKnown RBP7.06□□□□□ -1.28
GYPB-208ENST00000507009 EMILIN3Q9NT22 766 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 DDX20Q9UHI6 824 aaKnown RBP7.06□□□□□ -1.28
GYPB-208ENST00000507009 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 FOCADQ5VW36 1801 aa7.06□□□□□ -1.28
GYPB-208ENST00000507009 UNC80Q8N2C7 3258 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 PNMA6EA0A0J9YXQ4 647 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L15C9J2P7 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L13C9JLJ4 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 KBTBD13C9JR72 458 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L11C9JVI0 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L18D6R9N7 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L22D6RA61 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L17D6RBQ6 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L19D6RCP7 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L20D6RJB6 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 GTPBP6O43824 516 aaPredicted RBP7.05□□□□□ -1.28
GYPB-208ENST00000507009 MAP4K4O95819 1239 aaPredicted RBP7.05□□□□□ -1.28
GYPB-208ENST00000507009 CYP7A1P22680 504 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 ARID4AP29374 1257 aaPredicted RBP7.05□□□□□ -1.28
GYPB-208ENST00000507009 ZAP70P43403 619 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 CCNA1P78396 465 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP17L24Q0WX57 530 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 SHHQ15465 462 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 C9orf50Q5SZB4 431 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 ATF7IPQ6VMQ6 1270 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 DPP9Q86TI2 863 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 FOXP4Q8IVH2 680 aaPredicted RBP7.05□□□□□ -1.28
GYPB-208ENST00000507009 GTF3C2Q8WUA4 911 aaPredicted RBP7.05□□□□□ -1.28
GYPB-208ENST00000507009 USP6NLQ92738 828 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 FRAT1Q92837 279 aaPredicted RBP7.05□□□□□ -1.28
GYPB-208ENST00000507009 BADQ92934 168 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 CLUAP1Q96AJ1 413 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 CDX2Q99626 313 aaPredicted RBP7.05□□□□□ -1.28
GYPB-208ENST00000507009 DBNDD2Q9BQY9 259 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 BTBD7Q9P203 1132 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 TNNQ9UQP3 1299 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 LTBP2Q14767 1821 aa7.05□□□□□ -1.28
GYPB-208ENST00000507009 DNAH12Q6ZR08 3092 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 SLC15A5A6NIM6 579 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 TK2O00142 265 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 MPHOSPH10O00566 681 aaKnown RBP7.04□□□□□ -1.28
GYPB-208ENST00000507009 CNMDO75829 334 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 IDH1O75874 414 aaKnown RBP7.04□□□□□ -1.28
GYPB-208ENST00000507009 GNAI2P04899 355 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 CYP2E1P05181 493 aaPredicted RBP7.04□□□□□ -1.28
GYPB-208ENST00000507009 FOSL2P15408 326 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 VCAM1P19320 739 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 PTPREP23469 700 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 PDE4AP27815 886 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 PLS1Q14651 629 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 TRIM60Q495X7 471 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 CCDC158Q5M9N0 1113 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 PRAMEF19Q5SWL8 479 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 TRPV1Q8NER1 839 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 ACER1Q8TDN7 264 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 LPAR1Q92633 364 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 TANGO6Q9C0B7 1094 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 RPAP3Q9H6T3 665 aaPredicted RBP7.04□□□□□ -1.28
GYPB-208ENST00000507009 PIH1D3Q9NQM4 214 aaKnown RBP7.04□□□□□ -1.28
GYPB-208ENST00000507009 RABGAP1Q9Y3P9 1069 aa7.04□□□□□ -1.28
GYPB-208ENST00000507009 DNM1LO00429 736 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 MSCO60682 206 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 ADORA2AP29274 412 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 ADCYAP1R1P41586 468 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 CERKLQ49MI3 558 aaPredicted RBP7.03□□□□□ -1.28
GYPB-208ENST00000507009 TNNI3KQ59H18 835 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 FAM109BQ6ICB4 259 aaPredicted RBP7.03□□□□□ -1.28
GYPB-208ENST00000507009 SLC39A5Q6ZMH5 540 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 CATSPERGQ6ZRH7 1159 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 SH3RF1Q7Z6J0 888 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms