RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 PRDM1O75626 825 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 SHMT1P34896 483 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 NT5C2P49902 561 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 MAP3K10Q02779 954 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 PDE4BQ07343 736 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 FOXP4Q8IVH2 680 aaPredicted RBP11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 ZSCAN29Q8IWY8 852 aaPredicted RBP11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 JMYQ8N9B5 988 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 KRT23Q9C075 422 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 SWAP70Q9UH65 585 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 PPP2R3BQ9Y5P8 575 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 CYP46A1Q9Y6A2 500 aa11.77□□□□□ -0.53
NDUFS4-204ENST00000506974 FAM196BA6NMK8 535 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 KDM4AO75164 1064 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 NEK4P51957 841 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 TRDNQ13061 729 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 TATDN1Q6P1N9 297 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 DHX32Q7L7V1 743 aaKnown RBP11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 RALYLQ86SE5 291 aaKnown RBP11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 DCPSQ96C86 337 aaKnown RBP11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 AGXT2Q9BYV1 514 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 ALDH8A1Q9H2A2 487 aaPredicted RBP11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 ZSWIM5Q9P217 1185 aa11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
NDUFS4-204ENST00000506974 RCCD1A6NED2 376 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 ADM5C9JUS6 153 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 PRC1O43663 620 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 DNAJB2P25686 324 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 MCM5P33992 734 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 RRP12Q5JTH9 1297 aaKnown RBP11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 NBPF12Q5TAG4 269 aaPredicted RBP11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 CHST3Q7LGC8 479 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 FBXL16Q8N461 479 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 ESR2Q92731 530 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 ZNF287Q9HBT7 754 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 PDRG1Q9NUG6 133 aa11.75□□□□□ -0.53
NDUFS4-204ENST00000506974 RASSF10A6NK89 507 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 AK2P54819 239 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 RRP1BQ14684 758 aaKnown RBP11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 FAM47AQ5JRC9 791 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 IGDCC4Q8TDY8 1250 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 NLRP7Q8WX94 980 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 SNX21Q969T3 373 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 MTA3Q9BTC8 594 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 LRRC2Q9BYS8 371 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 TOMM22Q9NS69 142 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 PARP14Q460N5 1801 aa11.74□□□□□ -0.53
NDUFS4-204ENST00000506974 IGKV6D-41A0A0C4DH26 115 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 SH2B2O14492 632 aaPredicted RBP11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 ST18O60284 1047 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 AKR1B1P15121 316 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 NOVP48745 357 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 TFAP4Q01664 338 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 SEC23AQ15436 765 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 DLK2Q6UY11 383 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 Q6ZUG5 572 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 ZNF444Q8N0Y2 327 aaPredicted RBP11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 NEDD1Q8NHV4 660 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 TMEM87BQ96K49 555 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 LY9Q9HBG7 655 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 IL17RBQ9NRM6 502 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
NDUFS4-204ENST00000506974 TNKSO95271 1327 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 NMT2O60551 498 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 EVCP57679 992 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 JAG1P78504 1218 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 SHROOM1Q2M3G4 852 aaPredicted RBP11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 DEFB115Q30KQ5 88 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 CST9Q5W186 159 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 NUDT18Q6ZVK8 323 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 MIGA2Q7L4E1 593 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 USP48Q86UV5 1035 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 ENAHQ8N8S7 591 aaPredicted RBP11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 TATDN2Q93075 761 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 CCDC17Q96LX7 622 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 ZKSCAN3Q9BRR0 538 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 GLIS2Q9BZE0 524 aaPredicted RBP11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
NDUFS4-204ENST00000506974 TSPY3P0CV98 308 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms