RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 SUPT16HQ9Y5B9 1047 aaKnown RBP6.43□□□□□ -1.38
CLDND1-212ENST00000506885 CCDC189A1A4V9 331 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 WDR64B1ANS9 1081 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 ALG1L2C9J202 215 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 WDHD1O75717 1129 aaPredicted RBP6.42□□□□□ -1.38
CLDND1-212ENST00000506885 ASMTLO95671 621 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 LDHAP00338 332 aaKnown RBP6.42□□□□□ -1.38
CLDND1-212ENST00000506885 KRT18P05783 430 aaKnown RBP6.42□□□□□ -1.38
CLDND1-212ENST00000506885 RAB6AP20340 208 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 CD97P48960 835 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 PPP2R5AQ15172 486 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 MTERF2Q49AM1 385 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 FBXL19Q6PCT2 694 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 CCDC81Q6ZN84 652 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 SV2BQ7L1I2 683 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 FAM169BQ8N8A8 192 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 CHAC2Q8WUX2 184 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 RHOVQ96L33 236 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 ZC3H12CQ9C0D7 883 aaKnown RBP6.42□□□□□ -1.38
CLDND1-212ENST00000506885 SEMA6CQ9H3T2 930 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 CBX8Q9HC52 389 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 FAM105AQ9NUU6 356 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 ACTR10Q9NZ32 417 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 UBP1Q9NZI7 540 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 PIM2Q9P1W9 311 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 CD2APQ9Y5K6 639 aa6.42□□□□□ -1.38
CLDND1-212ENST00000506885 PRR19A6NJB7 356 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 TMPRSS2O15393 492 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 ZNF862O60290 1169 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 TGFB1P01137 390 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 NFICP08651 508 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 RLBP1P12271 317 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 POU3F3P20264 500 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-212ENST00000506885 PMLP29590 882 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 ZNF252P-AS1Q0IIN9 211 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 APOBRQ0VD83 1088 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 DHX8Q14562 1220 aaKnown RBP6.41□□□□□ -1.38
CLDND1-212ENST00000506885 TTF1Q15361 905 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-212ENST00000506885 DUSP27Q5VZP5 1158 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 MAP1SQ66K74 1059 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-212ENST00000506885 ZAR1Q86SH2 424 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 DDX42Q86XP3 938 aaKnown RBP eCLIP6.41□□□□□ -1.38
CLDND1-212ENST00000506885 FBXL6Q8N531 539 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 SAMD3Q8N6K7 520 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 JMYQ8N9B5 988 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 ACSBG1Q96GR2 724 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 TBC1D32Q96NH3 1257 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 PPP1R9AQ9ULJ8 1098 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 PTCH2Q9Y6C5 1203 aa6.41□□□□□ -1.38
CLDND1-212ENST00000506885 A0A0U1RQG5 324 aaPredicted RBP6.4□□□□□ -1.38
CLDND1-212ENST00000506885 KIAA1324LA8MWY0 1029 aaPredicted RBP6.4□□□□□ -1.38
CLDND1-212ENST00000506885 ENC1O14682 589 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 GREM1O60565 184 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 MYL1P05976 194 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 SSTR4P31391 388 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 FAM160A1Q05DH4 1040 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 BRD3Q15059 726 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 SYCP2LQ5T4T6 812 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 PPP4R4Q6NUP7 873 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 LLGL2Q6P1M3 1020 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 CLEC4GQ6UXB4 293 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 TMTC2Q8N394 836 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 NKD1Q969G9 470 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 SLC39A13Q96H72 371 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 SCYL1Q96KG9 808 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 FANCD2OSQ96PS1 177 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 ARNT2Q9HBZ2 717 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 MCM8Q9UJA3 840 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 PPT2Q9UMR5 302 aa6.4□□□□□ -1.38
CLDND1-212ENST00000506885 F13BP05160 661 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 BMP6P22004 513 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 GARTP22102 1010 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 STAT3P40763 770 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 EIF6P56537 245 aaKnown RBP6.39□□□□□ -1.39
CLDND1-212ENST00000506885 ERVK-24P63145 666 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 FOXD4Q12950 439 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-212ENST00000506885 SEPT6Q14141 434 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 VPS72Q15906 364 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 MAP3K11Q16584 847 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 TM4SF20Q53R12 229 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 CT47A1Q5JQC4 288 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-212ENST00000506885 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
CLDND1-212ENST00000506885 THNSL2Q86YJ6 484 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 SMYD4Q8IYR2 804 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-212ENST00000506885 PHC3Q8NDX5 983 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-212ENST00000506885 CACNA2D2Q9NY47 1150 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 PCOLCE2Q9UKZ9 415 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 PCDHGC5Q9Y5F6 944 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 KDM2BQ8NHM5 1336 aa6.39□□□□□ -1.39
CLDND1-212ENST00000506885 IFRD1O00458 451 aaPredicted RBP6.38□□□□□ -1.39
CLDND1-212ENST00000506885 MYCLP1P12525 358 aaPredicted RBP6.38□□□□□ -1.39
CLDND1-212ENST00000506885 FOSL1P15407 271 aa6.38□□□□□ -1.39
CLDND1-212ENST00000506885 HLTFQ14527 1009 aaKnown RBP eCLIP6.38□□□□□ -1.39
CLDND1-212ENST00000506885 LRRC41Q15345 812 aa6.38□□□□□ -1.39
CLDND1-212ENST00000506885 C21orf62-AS1Q17RA5 79 aa6.38□□□□□ -1.39
CLDND1-212ENST00000506885 CYP27C1Q4G0S4 372 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms