RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 TRIM17Q9Y577 477 aa17.46■□□□□ 0.39
DSP-203ENST00000506617 PARP14Q460N5 1801 aa17.46■□□□□ 0.39
DSP-203ENST00000506617 ECM2O94769 699 aaPredicted RBP17.45■□□□□ 0.38
DSP-203ENST00000506617 SEC24BO95487 1268 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 VCAM1P19320 739 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 HOXA7P31268 230 aaPredicted RBP17.45■□□□□ 0.38
DSP-203ENST00000506617 HAND2P61296 217 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 IRX3P78415 501 aaPredicted RBP17.45■□□□□ 0.38
DSP-203ENST00000506617 LACTBP83111 547 aaPredicted RBP17.45■□□□□ 0.38
DSP-203ENST00000506617 TRDNQ13061 729 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 PPP4R3BQ5MIZ7 849 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 OTOP1Q7RTM1 612 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 SIAH1Q8IUQ4 282 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 ESR2Q92731 530 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 MTA3Q9BTC8 594 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
DSP-203ENST00000506617 RLFQ13129 1914 aa17.45■□□□□ 0.38
DSP-203ENST00000506617 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 E7EWF7 191 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 HMGB1P09429 215 aaKnown RBP17.44■□□□□ 0.38
DSP-203ENST00000506617 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
DSP-203ENST00000506617 ATP2B2Q01814 1243 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 ABHD8Q96I13 439 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 EFCC1Q9HA90 598 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 TACC3Q9Y6A5 838 aa17.44■□□□□ 0.38
DSP-203ENST00000506617 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 CTGFP29279 349 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 KIF22Q14807 665 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 CCDC178Q5BJE1 867 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 FAM47AQ5JRC9 791 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 ANKRD13CQ8N6S4 541 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 NCOA7Q8NI08 942 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 TM6SF1Q9BZW5 370 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 INCENPQ9NQS7 918 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 SYNPO2Q9UMS6 1093 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 TMX2Q9Y320 296 aa17.43■□□□□ 0.38
DSP-203ENST00000506617 A0A0G2JMZ2 1700 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 IGKV6D-41A0A0C4DH26 115 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 NOVP48745 357 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
DSP-203ENST00000506617 HERVK_113P62684 666 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 PKN2Q16513 984 aaKnown RBP17.42■□□□□ 0.38
DSP-203ENST00000506617 FAM110CQ1W6H9 321 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 KIAA1755Q5JYT7 1200 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 P2RX7Q99572 595 aaKnown RBP17.42■□□□□ 0.38
DSP-203ENST00000506617 RPAP3Q9H6T3 665 aaPredicted RBP17.42■□□□□ 0.38
DSP-203ENST00000506617 VCPKMTQ9H867 229 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
DSP-203ENST00000506617 USP17L15C9J2P7 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L13C9JLJ4 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L11C9JVI0 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L18D6R9N7 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L22D6RA61 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L17D6RBQ6 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L19D6RCP7 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L20D6RJB6 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 PSMA5P28066 241 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 GCLCP48506 637 aaPredicted RBP17.41■□□□□ 0.38
DSP-203ENST00000506617 TFAP4Q01664 338 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 USP17L24Q0WX57 530 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 FBXO46Q6PJ61 603 aaPredicted RBP17.41■□□□□ 0.38
DSP-203ENST00000506617 CATSPERGQ6ZRH7 1159 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 RALYLQ86SE5 291 aaKnown RBP17.41■□□□□ 0.38
DSP-203ENST00000506617 CEP95Q96GE4 821 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
DSP-203ENST00000506617 TSPY2A6NKD2 308 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 RANBP6O60518 1105 aaKnown RBP17.4■□□□□ 0.38
DSP-203ENST00000506617 PSMC4P43686 418 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 ARHGEF6Q15052 776 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 STOX1Q6ZVD7 989 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 SPICE1Q8N0Z3 855 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 LPAR1Q92633 364 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 TRIM47Q96LD4 638 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 TTC14Q96N46 770 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 NEK1Q96PY6 1258 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 TOMM22Q9NS69 142 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 NYAP2Q9P242 653 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 NEDD4P46934 1319 aa17.4■□□□□ 0.38
DSP-203ENST00000506617 COL11A1P12107 1806 aaPredicted RBP17.4■□□□□ 0.38
DSP-203ENST00000506617 PEX10O60683 326 aa17.39■□□□□ 0.37
DSP-203ENST00000506617 MCM5P33992 734 aa17.39■□□□□ 0.37
DSP-203ENST00000506617 FCGRTP55899 365 aa17.39■□□□□ 0.37
DSP-203ENST00000506617 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
DSP-203ENST00000506617 DGKHQ86XP1 1220 aa17.39■□□□□ 0.37
DSP-203ENST00000506617 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
DSP-203ENST00000506617 FBXL16Q8N461 479 aa17.39■□□□□ 0.37
DSP-203ENST00000506617 ANKS1AQ92625 1134 aa17.39■□□□□ 0.37
DSP-203ENST00000506617 MKL1Q969V6 931 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms