RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 ARSHQ5FYA8 562 aa7.16□□□□□ -1.26
TRIO-208ENST00000506611 DIEXFQ68CQ4 756 aaKnown RBP7.16□□□□□ -1.26
TRIO-208ENST00000506611 OVOS1Q6IE37 1185 aa7.16□□□□□ -1.26
TRIO-208ENST00000506611 TSPYL5Q86VY4 417 aaPredicted RBP7.16□□□□□ -1.26
TRIO-208ENST00000506611 PHACTR4Q8IZ21 702 aa7.16□□□□□ -1.26
TRIO-208ENST00000506611 BACH2Q9BYV9 841 aa7.16□□□□□ -1.26
TRIO-208ENST00000506611 ADAMTS10Q9H324 1103 aa7.16□□□□□ -1.26
TRIO-208ENST00000506611 ANTXR1Q9H6X2 564 aa7.16□□□□□ -1.26
TRIO-208ENST00000506611 MFAP1P55081 439 aaKnown RBP7.15□□□□□ -1.26
TRIO-208ENST00000506611 SEZ6Q53EL9 994 aa7.15□□□□□ -1.26
TRIO-208ENST00000506611 TMEM87AQ8NBN3 555 aa7.15□□□□□ -1.26
TRIO-208ENST00000506611 KIRREL1Q96J84 757 aa7.15□□□□□ -1.26
TRIO-208ENST00000506611 EAF1Q96JC9 268 aaPredicted RBP7.15□□□□□ -1.26
TRIO-208ENST00000506611 ASPNQ9BXN1 380 aa7.15□□□□□ -1.26
TRIO-208ENST00000506611 GMIPQ9P107 970 aa7.15□□□□□ -1.26
TRIO-208ENST00000506611 RBM47A0AV96 593 aaKnown RBP7.14□□□□□ -1.27
TRIO-208ENST00000506611 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 AFMP43652 599 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 FANCCQ00597 558 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 ZNF124Q15973 351 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 TTC6Q86TZ1 520 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 TRIT1Q9H3H1 467 aaKnown RBP7.14□□□□□ -1.27
TRIO-208ENST00000506611 EBF1Q9UH73 591 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 DUSP13Q9UII6 198 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 TMEM59LQ9UK28 342 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 KCNH3Q9ULD8 1083 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 PCDHA11Q9Y5I1 949 aa7.14□□□□□ -1.27
TRIO-208ENST00000506611 CC2D2AQ9P2K1 1620 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 LRRC10BA6NIK2 292 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 GLI1P08151 1106 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 HK2P52789 917 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 ZNF394Q53GI3 561 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 CDCP2Q5VXM1 449 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 GK5Q6ZS86 529 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 SLITRK4Q8IW52 837 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 ATG4CQ96DT6 458 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 NT5C1AQ9BXI3 368 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 CNNM2Q9H8M5 875 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 GPATCH2Q9NW75 528 aa7.13□□□□□ -1.27
TRIO-208ENST00000506611 ZGLP1P0C6A0 271 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 GBP1P32455 592 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 TRHRP34981 398 aaPredicted RBP7.12□□□□□ -1.27
TRIO-208ENST00000506611 JAG1P78504 1218 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 EGR3Q06889 387 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 APOBRQ0VD83 1088 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 SNW1Q13573 536 aaKnown RBP7.12□□□□□ -1.27
TRIO-208ENST00000506611 MLANAQ16655 118 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 PRR23BQ6ZRT6 265 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 REXO1Q8N1G1 1221 aaKnown RBP7.12□□□□□ -1.27
TRIO-208ENST00000506611 PCDHGB7Q9Y5F8 929 aa7.12□□□□□ -1.27
TRIO-208ENST00000506611 RECKO95980 971 aa7.11□□□□□ -1.27
TRIO-208ENST00000506611 HPXP02790 462 aa7.11□□□□□ -1.27
TRIO-208ENST00000506611 RAG1P15918 1043 aa7.11□□□□□ -1.27
TRIO-208ENST00000506611 TIGD5Q53EQ6 642 aa7.11□□□□□ -1.27
TRIO-208ENST00000506611 KCNK12Q9HB15 430 aa7.11□□□□□ -1.27
TRIO-208ENST00000506611 ZNF281Q9Y2X9 895 aa7.11□□□□□ -1.27
TRIO-208ENST00000506611 MEIS3P2A8K0S8 358 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 FARP2O94887 1054 aaPredicted RBP7.1□□□□□ -1.27
TRIO-208ENST00000506611 ZNF76P36508 570 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 TEKQ02763 1124 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 TMEM67Q5HYA8 995 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 NBPF12Q5TAG4 269 aaPredicted RBP7.1□□□□□ -1.27
TRIO-208ENST00000506611 NLRC3Q7RTR2 1065 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 TMEM192Q8IY95 271 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 ZNF512BQ96KM6 892 aaPredicted RBP7.1□□□□□ -1.27
TRIO-208ENST00000506611 SPON2Q9BUD6 331 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 HDAC8Q9BY41 377 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 C19orf44Q9H6X5 657 aa7.1□□□□□ -1.27
TRIO-208ENST00000506611 EIF4G1Q04637 1599 aaKnown RBP7.09□□□□□ -1.27
TRIO-208ENST00000506611 EFEMP2O95967 443 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 LTKP29376 864 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 MCM4P33991 863 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 RACK1P63244 317 aaKnown RBP7.09□□□□□ -1.27
TRIO-208ENST00000506611 NBPF9Q3BBW0 867 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 CILP2Q8IUL8 1156 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 KIAA0825Q8IV33 1275 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 NKD1Q969G9 470 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 G6PC3Q9BUM1 346 aa7.09□□□□□ -1.27
TRIO-208ENST00000506611 KRT1P04264 644 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 ACRP10323 421 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 NME1P15531 152 aaKnown RBP7.08□□□□□ -1.28
TRIO-208ENST00000506611 NMIQ13287 307 aaPredicted RBP7.08□□□□□ -1.28
TRIO-208ENST00000506611 MLECQ14165 292 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 USP48Q86UV5 1035 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 ABHD4Q8TB40 342 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 MYLIPQ8WY64 445 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 CCDC120Q96HB5 630 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 RNF32Q9H0A6 362 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 FAM53CQ9NYF3 392 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 SHROOM4Q9ULL8 1493 aa7.08□□□□□ -1.28
TRIO-208ENST00000506611 TNFRSF10CO14798 259 aa7.07□□□□□ -1.28
TRIO-208ENST00000506611 ZNF165P49910 485 aa7.07□□□□□ -1.28
TRIO-208ENST00000506611 FZD5Q13467 585 aa7.07□□□□□ -1.28
TRIO-208ENST00000506611 MPZL3Q6UWV2 235 aa7.07□□□□□ -1.28
TRIO-208ENST00000506611 USHBP1Q8N6Y0 703 aa7.07□□□□□ -1.28
TRIO-208ENST00000506611 SYTL5Q8TDW5 730 aaPredicted RBP7.07□□□□□ -1.28
TRIO-208ENST00000506611 SLC9A7Q96T83 725 aa7.07□□□□□ -1.28
TRIO-208ENST00000506611 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms