RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 TTC6Q86TZ1 520 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 FBXL6Q8N531 539 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 DUSP23Q9BVJ7 150 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 OSBPL1AQ9BXW6 950 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 DNAJA2O60884 412 aa11.19□□□□□ -0.62
RETREG1-203ENST00000506441 UNC5AQ6ZN44 842 aa11.19□□□□□ -0.62
RETREG1-203ENST00000506441 MFSD14AQ96MC6 490 aa11.19□□□□□ -0.62
RETREG1-203ENST00000506441 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
RETREG1-203ENST00000506441 PRDM5Q9NQX1 630 aaPredicted RBP11.19□□□□□ -0.62
RETREG1-203ENST00000506441 FSTP19883 344 aa11.18□□□□□ -0.62
RETREG1-203ENST00000506441 RUFY4Q6ZNE9 571 aa11.18□□□□□ -0.62
RETREG1-203ENST00000506441 BAHD1Q8TBE0 780 aaPredicted RBP11.18□□□□□ -0.62
RETREG1-203ENST00000506441 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
RETREG1-203ENST00000506441 DNAJC2Q99543 621 aaKnown RBP11.18□□□□□ -0.62
RETREG1-203ENST00000506441 SIRPGQ9P1W8 387 aa11.18□□□□□ -0.62
RETREG1-203ENST00000506441 A0A1W2PQH9 124 aa11.17□□□□□ -0.62
RETREG1-203ENST00000506441 SFRP5Q5T4F7 317 aa11.17□□□□□ -0.62
RETREG1-203ENST00000506441 CDH24Q86UP0 819 aa11.17□□□□□ -0.62
RETREG1-203ENST00000506441 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
RETREG1-203ENST00000506441 KCNH3Q9ULD8 1083 aa11.17□□□□□ -0.62
RETREG1-203ENST00000506441 CHD1O14646 1710 aa11.17□□□□□ -0.62
RETREG1-203ENST00000506441 SLITRK5O94991 958 aa11.16□□□□□ -0.62
RETREG1-203ENST00000506441 ITGB2P05107 769 aa11.16□□□□□ -0.62
RETREG1-203ENST00000506441 NCAPHQ15003 741 aa11.16□□□□□ -0.62
RETREG1-203ENST00000506441 FAM169BQ8N8A8 192 aa11.16□□□□□ -0.62
RETREG1-203ENST00000506441 MAPK8IP1Q9UQF2 711 aa11.16□□□□□ -0.62
RETREG1-203ENST00000506441 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 WDR64B1ANS9 1081 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 IGF2BP3O00425 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
RETREG1-203ENST00000506441 NAT2P11245 290 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 KIR3DL1P43629 444 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 RAB33AQ14088 237 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 LARP1BQ659C4 914 aaKnown RBP11.15□□□□□ -0.62
RETREG1-203ENST00000506441 RNF141Q8WVD5 230 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 SLC6A18Q96N87 628 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 ASPNQ9BXN1 380 aa11.15□□□□□ -0.62
RETREG1-203ENST00000506441 PROCP04070 461 aa11.14□□□□□ -0.63
RETREG1-203ENST00000506441 ACRP10323 421 aa11.14□□□□□ -0.63
RETREG1-203ENST00000506441 PMS1P54277 932 aaKnown RBP11.14□□□□□ -0.63
RETREG1-203ENST00000506441 SLC7A5Q01650 507 aa11.14□□□□□ -0.63
RETREG1-203ENST00000506441 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
RETREG1-203ENST00000506441 HNRNPLLQ8WVV9 542 aaKnown RBP11.14□□□□□ -0.63
RETREG1-203ENST00000506441 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
RETREG1-203ENST00000506441 LEMD3Q9Y2U8 911 aa11.14□□□□□ -0.63
RETREG1-203ENST00000506441 ADAMTS12P58397 1594 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 KLF4O43474 513 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 DDAH1O94760 285 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 UBOX5O94941 541 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 ADMP35318 185 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 RSPO4Q2I0M5 234 aaPredicted RBP11.13□□□□□ -0.63
RETREG1-203ENST00000506441 NKAPLQ5M9Q1 402 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 DNAJB8Q8NHS0 232 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 FBXL18Q96ME1 805 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 KREMEN1Q96MU8 473 aa11.13□□□□□ -0.63
RETREG1-203ENST00000506441 ASCC2Q9H1I8 757 aaPredicted RBP11.13□□□□□ -0.63
RETREG1-203ENST00000506441 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
RETREG1-203ENST00000506441 FAM86C2PA6NEL3 165 aa11.12□□□□□ -0.63
RETREG1-203ENST00000506441 EOMESO95936 686 aa11.12□□□□□ -0.63
RETREG1-203ENST00000506441 F13BP05160 661 aa11.12□□□□□ -0.63
RETREG1-203ENST00000506441 POLR2BP30876 1174 aaKnown RBP11.12□□□□□ -0.63
RETREG1-203ENST00000506441 VHLLQ6RSH7 139 aa11.12□□□□□ -0.63
RETREG1-203ENST00000506441 SHKBP1Q8TBC3 707 aa11.12□□□□□ -0.63
RETREG1-203ENST00000506441 GATA6Q92908 595 aa11.12□□□□□ -0.63
RETREG1-203ENST00000506441 MKRN2Q9H000 416 aaKnown RBP11.12□□□□□ -0.63
RETREG1-203ENST00000506441 ZNF214Q9UL59 606 aaPredicted RBP11.12□□□□□ -0.63
RETREG1-203ENST00000506441 DYRK3O43781 588 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 LEFTY1O75610 366 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 TCEAL1Q15170 157 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 ZNF765Q7L2R6 523 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 PPP1R13LQ8WUF5 828 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 MKL1Q969V6 931 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 TNKS2Q9H2K2 1166 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 MKNK2Q9HBH9 465 aa11.11□□□□□ -0.63
RETREG1-203ENST00000506441 FAM170BA6NMN3 283 aa11.1□□□□□ -0.63
RETREG1-203ENST00000506441 OSBPL2Q9H1P3 480 aa11.1□□□□□ -0.63
RETREG1-203ENST00000506441 CARMIL1Q5VZK9 1371 aa11.1□□□□□ -0.63
RETREG1-203ENST00000506441 FAM155AB1AL88 458 aaPredicted RBP11.09□□□□□ -0.63
RETREG1-203ENST00000506441 CYP26A1O43174 497 aa11.09□□□□□ -0.63
RETREG1-203ENST00000506441 GRIK1P39086 918 aa11.09□□□□□ -0.63
RETREG1-203ENST00000506441 NBPF12Q5TAG4 269 aaPredicted RBP11.09□□□□□ -0.63
RETREG1-203ENST00000506441 C22orf34Q6ZV56 151 aa11.09□□□□□ -0.63
RETREG1-203ENST00000506441 LRP10Q7Z4F1 713 aa11.09□□□□□ -0.63
RETREG1-203ENST00000506441 CBX7O95931 251 aa11.08□□□□□ -0.64
RETREG1-203ENST00000506441 ZYXQ15942 572 aaKnown RBP11.08□□□□□ -0.64
RETREG1-203ENST00000506441 DDR2Q16832 855 aa11.08□□□□□ -0.64
RETREG1-203ENST00000506441 KIAA1211LQ6NV74 962 aa11.08□□□□□ -0.64
RETREG1-203ENST00000506441 FAM178BQ8IXR5 827 aa11.08□□□□□ -0.64
RETREG1-203ENST00000506441 TMEM192Q8IY95 271 aa11.08□□□□□ -0.64
RETREG1-203ENST00000506441 PIWIL2Q8TC59 973 aaKnown RBP11.08□□□□□ -0.64
RETREG1-203ENST00000506441 PIM2Q9P1W9 311 aa11.08□□□□□ -0.64
RETREG1-203ENST00000506441 LTBP3Q9NS15 1303 aa11.08□□□□□ -0.64
RETREG1-203ENST00000506441 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
RETREG1-203ENST00000506441 ZNF143P52747 638 aaPredicted RBP11.07□□□□□ -0.64
RETREG1-203ENST00000506441 DPH6Q7L8W6 267 aa11.07□□□□□ -0.64
RETREG1-203ENST00000506441 CCDC113Q9H0I3 377 aa11.07□□□□□ -0.64
RETREG1-203ENST00000506441 SEMA6BQ9H3T3 888 aa11.07□□□□□ -0.64
RETREG1-203ENST00000506441 ST7Q9NRC1 585 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms