RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 VCPKMTQ9H867 229 aa18.51■□□□□ 0.55
MED28-204ENST00000506409 PDE4AP27815 886 aa18.5■□□□□ 0.55
MED28-204ENST00000506409 GRK4P32298 578 aa18.5■□□□□ 0.55
MED28-204ENST00000506409 ERVK-9P63128 1117 aa18.5■□□□□ 0.55
MED28-204ENST00000506409 ERVK-24P63145 666 aa18.5■□□□□ 0.55
MED28-204ENST00000506409 KIAA1755Q5JYT7 1200 aa18.5■□□□□ 0.55
MED28-204ENST00000506409 SPICE1Q8N0Z3 855 aa18.5■□□□□ 0.55
MED28-204ENST00000506409 RABGAP1Q9Y3P9 1069 aa18.5■□□□□ 0.55
MED28-204ENST00000506409 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
MED28-204ENST00000506409 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
MED28-204ENST00000506409 SPDYE16A6NNV3 312 aaPredicted RBP18.49■□□□□ 0.55
MED28-204ENST00000506409 MYCP01106 439 aaPredicted RBP18.49■□□□□ 0.55
MED28-204ENST00000506409 POTEEQ6S8J3 1075 aa18.49■□□□□ 0.55
MED28-204ENST00000506409 LBX2Q6XYB7 198 aa18.49■□□□□ 0.55
MED28-204ENST00000506409 ZNF589Q86UQ0 364 aaPredicted RBP18.49■□□□□ 0.55
MED28-204ENST00000506409 CCAR1Q8IX12 1150 aaKnown RBP18.49■□□□□ 0.55
MED28-204ENST00000506409 SLAIN1Q8ND83 568 aa18.49■□□□□ 0.55
MED28-204ENST00000506409 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
MED28-204ENST00000506409 GOPCQ9HD26 462 aa18.49■□□□□ 0.55
MED28-204ENST00000506409 DIAPH3Q9NSV4 1193 aa18.49■□□□□ 0.55
MED28-204ENST00000506409 HIP1O00291 1037 aa18.48■□□□□ 0.55
MED28-204ENST00000506409 WDR46O15213 610 aaKnown RBP18.48■□□□□ 0.55
MED28-204ENST00000506409 MAPK4P31152 587 aa18.48■□□□□ 0.55
MED28-204ENST00000506409 MFAP1P55081 439 aaKnown RBP18.48■□□□□ 0.55
MED28-204ENST00000506409 IRF5Q13568 498 aa18.48■□□□□ 0.55
MED28-204ENST00000506409 COG2Q14746 738 aa18.48■□□□□ 0.55
MED28-204ENST00000506409 ALX1Q15699 326 aa18.48■□□□□ 0.55
MED28-204ENST00000506409 Q3C1V9 767 aa18.48■□□□□ 0.55
MED28-204ENST00000506409 HOXC10Q9NYD6 342 aa18.48■□□□□ 0.55
MED28-204ENST00000506409 BIN2Q9UBW5 565 aaPredicted RBP18.48■□□□□ 0.55
MED28-204ENST00000506409 KIAA0100Q14667 2235 aaKnown RBP18.47■□□□□ 0.55
MED28-204ENST00000506409 DOCK3Q8IZD9 2030 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 POTEFA5A3E0 1075 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 RAD21O60216 631 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 ADCY3O60266 1144 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 CNMDO75829 334 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 TSPY3P0CV98 308 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 TSPY8P0CW00 308 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
MED28-204ENST00000506409 CCNA1P78396 465 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 CTDSPL2Q05D32 466 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 CWC27Q6UX04 472 aaKnown RBP18.47■□□□□ 0.55
MED28-204ENST00000506409 PORCNQ9H237 461 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 NYAP2Q9P242 653 aa18.47■□□□□ 0.55
MED28-204ENST00000506409 IGKV6D-41A0A0C4DH26 115 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 FLOT1O75955 427 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 FGAP02671 866 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 ELNP15502 786 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 FAM47AQ5JRC9 791 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 PXYLP1Q8TE99 480 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 CEP95Q96GE4 821 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 ANAPC4Q9UJX5 808 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 ZMYM6O95789 1325 aa18.46■□□□□ 0.55
MED28-204ENST00000506409 PLIN4Q96Q06 1357 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
MED28-204ENST00000506409 UBXN2AP68543 259 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 TFAP4Q01664 338 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 NEDD1Q8NHV4 660 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 SOCS4Q8WXH5 440 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 CWC22Q9HCG8 908 aaKnown RBP18.45■□□□□ 0.54
MED28-204ENST00000506409 MTMR4Q9NYA4 1195 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 BTBD7Q9P203 1132 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 CLIP2Q9UDT6 1046 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 GJD2Q9UKL4 321 aa18.45■□□□□ 0.54
MED28-204ENST00000506409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
MED28-204ENST00000506409 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
MED28-204ENST00000506409 TTLL1O95922 423 aa18.44■□□□□ 0.54
MED28-204ENST00000506409 DSG3P32926 999 aa18.44■□□□□ 0.54
MED28-204ENST00000506409 MTFR1Q15390 333 aa18.44■□□□□ 0.54
MED28-204ENST00000506409 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
MED28-204ENST00000506409 GPR142Q7Z601 462 aa18.44■□□□□ 0.54
MED28-204ENST00000506409 MB21D1Q8N884 522 aa18.44■□□□□ 0.54
MED28-204ENST00000506409 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
MED28-204ENST00000506409 BRCA2P51587 3418 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 TSPY2A6NKD2 308 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 F5H6K3 240 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 INHAP05111 366 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 KLRC3Q07444 240 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 FAM83BQ5T0W9 1011 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 WDR78Q5VTH9 848 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 PLEKHH3Q7Z736 793 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 ATG4CQ96DT6 458 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 INCENPQ9NQS7 918 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 RLFQ13129 1914 aa18.43■□□□□ 0.54
MED28-204ENST00000506409 ORC4O43929 436 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 RANBP6O60518 1105 aaKnown RBP18.42■□□□□ 0.54
MED28-204ENST00000506409 NDUFB10O96000 172 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 CCL5P13501 91 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 EN2P19622 333 aaPredicted RBP18.42■□□□□ 0.54
MED28-204ENST00000506409 CYP2B6P20813 491 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 HAND2P61296 217 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 LRRC47Q8N1G4 583 aaKnown RBP18.42■□□□□ 0.54
MED28-204ENST00000506409 MKL1Q969V6 931 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 NUP88Q99567 741 aaPredicted RBP18.42■□□□□ 0.54
MED28-204ENST00000506409 TOMM22Q9NS69 142 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 FBXO28Q9NVF7 368 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 SYNPO2Q9UMS6 1093 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 A0A0G2JMZ2 1700 aa18.42■□□□□ 0.54
MED28-204ENST00000506409 MYH4Q9Y623 1939 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms