RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CAPN6Q9Y6Q1 641 aa8.87□□□□□ -0.99
NIPBL-205ENST00000505998 COL17A1Q9UMD9 1497 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-205ENST00000505998 SMAD7O15105 426 aaKnown RBP8.86□□□□□ -0.99
NIPBL-205ENST00000505998 STK10O94804 968 aaKnown RBP8.86□□□□□ -0.99
NIPBL-205ENST00000505998 CD97P48960 835 aa8.86□□□□□ -0.99
NIPBL-205ENST00000505998 CASP7P55210 303 aa8.86□□□□□ -0.99
NIPBL-205ENST00000505998 NKPD1Q17RQ9 610 aa8.86□□□□□ -0.99
NIPBL-205ENST00000505998 NBPF12Q5TAG4 269 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-205ENST00000505998 SPACA3Q8IXA5 215 aa8.86□□□□□ -0.99
NIPBL-205ENST00000505998 ZNF512BQ96KM6 892 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-205ENST00000505998 Q96M66 194 aa8.86□□□□□ -0.99
NIPBL-205ENST00000505998 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-205ENST00000505998 SUCOQ9UBS9 1254 aaKnown RBP8.86□□□□□ -0.99
NIPBL-205ENST00000505998 PLAGL2Q9UPG8 496 aa8.86□□□□□ -0.99
NIPBL-205ENST00000505998 TMEM265A0A087WTH1 108 aa8.85□□□□□ -0.99
NIPBL-205ENST00000505998 LRRN2O75325 713 aa8.85□□□□□ -0.99
NIPBL-205ENST00000505998 MED26O95402 600 aa8.85□□□□□ -0.99
NIPBL-205ENST00000505998 TNK2Q07912 1038 aa8.85□□□□□ -0.99
NIPBL-205ENST00000505998 CDKAL1Q5VV42 579 aa8.85□□□□□ -0.99
NIPBL-205ENST00000505998 PIWIL2Q8TC59 973 aaKnown RBP8.85□□□□□ -0.99
NIPBL-205ENST00000505998 SREK1Q8WXA9 508 aaKnown RBP8.85□□□□□ -0.99
NIPBL-205ENST00000505998 VWCEQ96DN2 955 aa8.85□□□□□ -0.99
NIPBL-205ENST00000505998 MKRN2Q9H000 416 aaKnown RBP8.85□□□□□ -0.99
NIPBL-205ENST00000505998 TNKS2Q9H2K2 1166 aa8.85□□□□□ -0.99
NIPBL-205ENST00000505998 R3HCC1Q9Y3T6 440 aaKnown RBP8.85□□□□□ -0.99
NIPBL-205ENST00000505998 RBAK-RBAKDNI3L0D1 243 aa8.84□□□□□ -0.99
NIPBL-205ENST00000505998 CLCN7P51798 805 aa8.84□□□□□ -0.99
NIPBL-205ENST00000505998 PMS1P54277 932 aaKnown RBP8.84□□□□□ -0.99
NIPBL-205ENST00000505998 BBS9Q3SYG4 887 aa8.84□□□□□ -0.99
NIPBL-205ENST00000505998 DTWD2Q8NBA8 298 aa8.84□□□□□ -0.99
NIPBL-205ENST00000505998 PHAXQ9H814 394 aaKnown RBP8.84□□□□□ -0.99
NIPBL-205ENST00000505998 PCMTD2Q9NV79 361 aa8.84□□□□□ -0.99
NIPBL-205ENST00000505998 ACTR10Q9NZ32 417 aa8.84□□□□□ -0.99
NIPBL-205ENST00000505998 PPP1R1BQ9UD71 204 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-205ENST00000505998 SNX11Q9Y5W9 270 aa8.84□□□□□ -0.99
NIPBL-205ENST00000505998 LTBP3Q9NS15 1303 aa8.83□□□□□ -1
NIPBL-205ENST00000505998 SCO2A0A1W2PP80 73 aa8.83□□□□□ -1
NIPBL-205ENST00000505998 GTF2F1P35269 517 aaKnown RBP eCLIP8.83□□□□□ -1
NIPBL-205ENST00000505998 CCDC144CPQ8IYA2 1237 aa8.83□□□□□ -1
NIPBL-205ENST00000505998 MISP3Q96FF7 219 aa8.83□□□□□ -1
NIPBL-205ENST00000505998 HRASLS5Q96KN8 279 aa8.83□□□□□ -1
NIPBL-205ENST00000505998 SHROOM4Q9ULL8 1493 aa8.83□□□□□ -1
NIPBL-205ENST00000505998 KIAA1324LA8MWY0 1029 aaPredicted RBP8.82□□□□□ -1
NIPBL-205ENST00000505998 SPINK2P20155 84 aa8.82□□□□□ -1
NIPBL-205ENST00000505998 LRP8Q14114 963 aa8.82□□□□□ -1
NIPBL-205ENST00000505998 TDRD10Q5VZ19 366 aaKnown RBP8.82□□□□□ -1
NIPBL-205ENST00000505998 ANKS3Q6ZW76 656 aa8.82□□□□□ -1
NIPBL-205ENST00000505998 DTX1Q86Y01 620 aa8.82□□□□□ -1
NIPBL-205ENST00000505998 SMARCC1Q92922 1105 aaPredicted RBP8.82□□□□□ -1
NIPBL-205ENST00000505998 HSPA12BQ96MM6 686 aa8.82□□□□□ -1
NIPBL-205ENST00000505998 ZNF214Q9UL59 606 aaPredicted RBP8.82□□□□□ -1
NIPBL-205ENST00000505998 ST14Q9Y5Y6 855 aa8.82□□□□□ -1
NIPBL-205ENST00000505998 BICRAQ9NZM4 1560 aa8.82□□□□□ -1
NIPBL-205ENST00000505998 C9IYK1 514 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 H3BS24 57 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 TP53P04637 393 aaPredicted RBP8.81□□□□□ -1
NIPBL-205ENST00000505998 PRKCQQ04759 706 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 AOC3Q16853 763 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 NBPF9Q3BBW0 867 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 GNPTABQ3T906 1256 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 LARP1BQ659C4 914 aaKnown RBP8.81□□□□□ -1
NIPBL-205ENST00000505998 STK11IPQ8N1F8 1099 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 ASCC2Q9H1I8 757 aaPredicted RBP8.81□□□□□ -1
NIPBL-205ENST00000505998 FAM86C1Q9NVL1 165 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 VAV3Q9UKW4 847 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 PCDHB10Q9UN67 800 aa8.81□□□□□ -1
NIPBL-205ENST00000505998 SLC7A5Q01650 507 aa8.8□□□□□ -1
NIPBL-205ENST00000505998 PPFIBP1Q86W92 1011 aa8.8□□□□□ -1
NIPBL-205ENST00000505998 CKAP2LQ8IYA6 745 aa8.8□□□□□ -1
NIPBL-205ENST00000505998 HNRNPLLQ8WVV9 542 aaKnown RBP8.8□□□□□ -1
NIPBL-205ENST00000505998 DHX38Q92620 1227 aaKnown RBP8.8□□□□□ -1
NIPBL-205ENST00000505998 ARMC5Q96C12 935 aa8.8□□□□□ -1
NIPBL-205ENST00000505998 TRIT1Q9H3H1 467 aaKnown RBP8.8□□□□□ -1
NIPBL-205ENST00000505998 FBXL21Q9UKT6 434 aa8.8□□□□□ -1
NIPBL-205ENST00000505998 ANGEL1Q9UNK9 670 aaKnown RBP8.8□□□□□ -1
NIPBL-205ENST00000505998 PRNPP04156 253 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 AUHQ13825 339 aaKnown RBP8.79□□□□□ -1
NIPBL-205ENST00000505998 CLEC16AQ2KHT3 1053 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 VHLLQ6RSH7 139 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 THAP5Q7Z6K1 395 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 VSIG10LQ86VR7 867 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 ASB11Q8WXH4 323 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 GPR62Q9BZJ7 368 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 SEMA3GQ9NS98 782 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 GPATCH2Q9NW75 528 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 ZSWIM5Q9P217 1185 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 CCDC39Q9UFE4 941 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 SLC5A6Q9Y289 635 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 PCDHB12Q9Y5F1 795 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 PITPNM2Q9BZ72 1349 aa8.79□□□□□ -1
NIPBL-205ENST00000505998 HYAL3O43820 417 aaPredicted RBP8.78□□□□□ -1
NIPBL-205ENST00000505998 BNIP3Q12983 259 aa8.78□□□□□ -1
NIPBL-205ENST00000505998 NMIQ13287 307 aaPredicted RBP8.78□□□□□ -1
NIPBL-205ENST00000505998 FXNQ16595 210 aa8.78□□□□□ -1
NIPBL-205ENST00000505998 AXDND1Q5T1B0 1012 aaPredicted RBP8.78□□□□□ -1
NIPBL-205ENST00000505998 C7orf61Q8IZ16 206 aa8.78□□□□□ -1
NIPBL-205ENST00000505998 BCL7CQ8WUZ0 217 aaPredicted RBP8.78□□□□□ -1
NIPBL-205ENST00000505998 UBE2FQ969M7 185 aa8.78□□□□□ -1
NIPBL-205ENST00000505998 DRC1Q96MC2 740 aa8.78□□□□□ -1
NIPBL-205ENST00000505998 HIRIP3Q9BW71 556 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms