RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 PPFIBP1Q86W92 1011 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 CKAP2LQ8IYA6 745 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 PLD6Q8N2A8 252 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 MICAL1Q8TDZ2 1067 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 ARMC5Q96C12 935 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 DNAJC2Q99543 621 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 HIRIP3Q9BW71 556 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 SUCOQ9UBS9 1254 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 PLAGL2Q9UPG8 496 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 ZNF865P0CJ78 1059 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 KIR3DL1P43629 444 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 TNK2Q07912 1038 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 NKPD1Q17RQ9 610 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 GNPTABQ3T906 1256 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 COX4I2Q96KJ9 171 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 MKRN2Q9H000 416 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 PHAXQ9H814 394 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 MKNK2Q9HBH9 465 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 ST7Q9NRC1 585 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 RNF112Q9ULX5 631 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
TOPBP1-204ENST00000505804 FAM155AB1AL88 458 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 MED26O95402 600 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 RNF4P78317 190 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 SLC7A5Q01650 507 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 AXDND1Q5T1B0 1012 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 CDKAL1Q5VV42 579 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 C22orf34Q6ZV56 151 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 MFSD4AQ8N468 514 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 CELF2-AS1Q8N7Q2 184 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 DTWD2Q8NBA8 298 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 PMFBP1Q8TBY8 1022 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 NETO1Q8TDF5 533 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 KCNH3Q9ULD8 1083 aa6.29□□□□□ -1.4
TOPBP1-204ENST00000505804 COBLO75128 1261 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 DDAH1O94760 285 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 CEACAM5P06731 702 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 SSTR4P31391 388 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 GRIK1P39086 918 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 AUHQ13825 339 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 RAB33AQ14088 237 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 FXNQ16595 210 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 NBPF9Q3BBW0 867 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 BBS9Q3SYG4 887 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 DCAF15Q66K64 600 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 KIAA1211LQ6NV74 962 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 VHLLQ6RSH7 139 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 C6orf15Q6UXA7 325 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 SPACA3Q8IXA5 215 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 CCDC144CPQ8IYA2 1237 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 UBXN4Q92575 508 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 HSPA12BQ96MM6 686 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 TRIM55Q9BYV6 548 aa6.28□□□□□ -1.4
TOPBP1-204ENST00000505804 B2RBV5 119 aa6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 IFI16Q16666 785 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 FAM178BQ8IXR5 827 aa6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 PRDM14Q9GZV8 571 aa6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 FBXL21Q9UKT6 434 aa6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 ST14Q9Y5Y6 855 aa6.27□□□□□ -1.41
TOPBP1-204ENST00000505804 WASH4PA8MWX3 477 aa6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 H3BS24 57 aa6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 MSMPQ1L6U9 139 aa6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 C7orf61Q8IZ16 206 aa6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 PIWIL2Q8TC59 973 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 SMARCC1Q92922 1105 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 DUSP15Q9H1R2 295 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 ZNF451Q9Y4E5 1061 aa6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 SNX11Q9Y5W9 270 aa6.26□□□□□ -1.41
TOPBP1-204ENST00000505804 TMEM265A0A087WTH1 108 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 U2SURPO15042 1029 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 GJB6O95452 261 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 CD247P20963 164 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 BNIP3Q12983 259 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 NCAPHQ15003 741 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 DDR2Q16832 855 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 ANKRD39Q53RE8 183 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 SOGA3Q5TF21 947 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 NBPF6Q5VWK0 638 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 TMC3Q7Z5M5 1100 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 UBE2FQ969M7 185 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 NBPF4Q96M43 638 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 HAUS7Q99871 368 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 ZSWIM5Q9P217 1185 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 PCDHB12Q9Y5F1 795 aa6.25□□□□□ -1.41
TOPBP1-204ENST00000505804 SHISA3A0PJX4 238 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 SHOXO15266 292 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 CBFA2T2O43439 604 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 IGSF3O75054 1194 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 SRFP11831 508 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 CD97P48960 835 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 CLCN7P51798 805 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 AOC3Q16853 763 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 ZMYM1Q5SVZ6 1142 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 HEATR6Q6AI08 1181 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms