RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 C11orf49Q9H6J7 331 aa29.72■■■□□ 2.35
HERC4-212ENST00000505760 ARHGEF10LQ9HCE6 1279 aa29.72■■■□□ 2.35
HERC4-212ENST00000505760 HOXC10Q9NYD6 342 aa29.72■■■□□ 2.35
HERC4-212ENST00000505760 CHGBP05060 677 aa29.71■■■□□ 2.35
HERC4-212ENST00000505760 AKR1B1P15121 316 aa29.71■■■□□ 2.35
HERC4-212ENST00000505760 PTPREP23469 700 aa29.71■■■□□ 2.35
HERC4-212ENST00000505760 C12orf60Q5U649 245 aa29.71■■■□□ 2.35
HERC4-212ENST00000505760 SLC4A4Q9Y6R1 1079 aa29.71■■■□□ 2.35
HERC4-212ENST00000505760 CYP2D7A0A087X1C5 515 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 USP17L12C9JPN9 530 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 USP17L21D6R901 530 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 CCND3P30281 292 aaPredicted RBP29.7■■■□□ 2.35
HERC4-212ENST00000505760 MNX1P50219 401 aaPredicted RBP29.7■■■□□ 2.35
HERC4-212ENST00000505760 ICA1Q05084 483 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 CCDC17Q96LX7 622 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 PRO3102Q9H379 93 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 SH2D4AQ9H788 454 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 ECHDC1Q9NTX5 307 aa29.7■■■□□ 2.35
HERC4-212ENST00000505760 CDK8P49336 464 aa29.69■■■□□ 2.34
HERC4-212ENST00000505760 MFSD14CQ5VZR4 134 aa29.69■■■□□ 2.34
HERC4-212ENST00000505760 C7orf61Q8IZ16 206 aa29.69■■■□□ 2.34
HERC4-212ENST00000505760 LPAR1Q92633 364 aa29.69■■■□□ 2.34
HERC4-212ENST00000505760 GRB14Q14449 540 aa29.68■■■□□ 2.34
HERC4-212ENST00000505760 CLEC10AQ8IUN9 316 aa29.68■■■□□ 2.34
HERC4-212ENST00000505760 PUS7LQ9H0K6 701 aaKnown RBP29.68■■■□□ 2.34
HERC4-212ENST00000505760 ATP2B2Q01814 1243 aa29.67■■■□□ 2.34
HERC4-212ENST00000505760 C16orf86Q6ZW13 317 aa29.67■■■□□ 2.34
HERC4-212ENST00000505760 SPICE1Q8N0Z3 855 aa29.67■■■□□ 2.34
HERC4-212ENST00000505760 GPATCH3Q96I76 525 aa29.67■■■□□ 2.34
HERC4-212ENST00000505760 RLFQ13129 1914 aa29.67■■■□□ 2.34
HERC4-212ENST00000505760 SMIM22K7EJ46 135 aa29.66■■■□□ 2.34
HERC4-212ENST00000505760 KIAA1755Q5JYT7 1200 aa29.66■■■□□ 2.34
HERC4-212ENST00000505760 LHX8Q68G74 356 aa29.66■■■□□ 2.34
HERC4-212ENST00000505760 MOV10L1Q9BXT6 1211 aaKnown RBP29.66■■■□□ 2.34
HERC4-212ENST00000505760 FLRT1Q9NZU1 646 aa29.66■■■□□ 2.34
HERC4-212ENST00000505760 TMX2Q9Y320 296 aa29.66■■■□□ 2.34
HERC4-212ENST00000505760 FLOT1O75955 427 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 HOXC6P09630 235 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 CTR9Q6PD62 1173 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 SIAH1Q8IUQ4 282 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 MB21D1Q8N884 522 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 SPATC1LQ9H0A9 340 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 DCTPP1Q9H773 170 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 VCPKMTQ9H867 229 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 STAP2Q9UGK3 403 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 A0A0G2JMZ2 1700 aa29.65■■■□□ 2.34
HERC4-212ENST00000505760 PLS1Q14651 629 aa29.64■■■□□ 2.34
HERC4-212ENST00000505760 DPP9Q86TI2 863 aa29.64■■■□□ 2.34
HERC4-212ENST00000505760 ZMYND8Q9ULU4 1186 aaPredicted RBP29.64■■■□□ 2.34
HERC4-212ENST00000505760 FRMPD3Q5JV73 1810 aa29.64■■■□□ 2.33
HERC4-212ENST00000505760 DNAH12Q6ZR08 3092 aa29.63■■■□□ 2.33
HERC4-212ENST00000505760 A0A1W2PPC1 479 aa29.63■■■□□ 2.33
HERC4-212ENST00000505760 STRNO43815 780 aa29.63■■■□□ 2.33
HERC4-212ENST00000505760 DSG3P32926 999 aa29.63■■■□□ 2.33
HERC4-212ENST00000505760 SAMD1Q6SPF0 538 aaPredicted RBP29.63■■■□□ 2.33
HERC4-212ENST00000505760 NPLOC4Q8TAT6 608 aa29.63■■■□□ 2.33
HERC4-212ENST00000505760 ARPP21Q9UBL0 812 aaPredicted RBP29.63■■■□□ 2.33
HERC4-212ENST00000505760 PFASO15067 1338 aa29.63■■■□□ 2.33
HERC4-212ENST00000505760 WDR46O15213 610 aaKnown RBP29.62■■■□□ 2.33
HERC4-212ENST00000505760 ERCC3P19447 782 aa29.62■■■□□ 2.33
HERC4-212ENST00000505760 CNGA1P29973 690 aa29.62■■■□□ 2.33
HERC4-212ENST00000505760 KBTBD3Q8NAB2 608 aa29.62■■■□□ 2.33
HERC4-212ENST00000505760 SHCBP1Q8NEM2 672 aa29.62■■■□□ 2.33
HERC4-212ENST00000505760 KANSL2Q9H9L4 492 aa29.62■■■□□ 2.33
HERC4-212ENST00000505760 EEF2P13639 858 aaKnown RBP29.61■■■□□ 2.33
HERC4-212ENST00000505760 ADORA2AP29274 412 aa29.61■■■□□ 2.33
HERC4-212ENST00000505760 STRBPQ96SI9 672 aaKnown RBP29.61■■■□□ 2.33
HERC4-212ENST00000505760 PARP14Q460N5 1801 aa29.61■■■□□ 2.33
HERC4-212ENST00000505760 ZNF236Q9UL36 1845 aa29.61■■■□□ 2.33
HERC4-212ENST00000505760 COL6A1P12109 1028 aa29.6■■■□□ 2.33
HERC4-212ENST00000505760 CYP2C19P33261 490 aa29.6■■■□□ 2.33
HERC4-212ENST00000505760 TSHZ3Q63HK5 1081 aa29.6■■■□□ 2.33
HERC4-212ENST00000505760 ATG4CQ96DT6 458 aa29.6■■■□□ 2.33
HERC4-212ENST00000505760 MROH8Q9H579 483 aa29.6■■■□□ 2.33
HERC4-212ENST00000505760 MSCO60682 206 aa29.59■■■□□ 2.33
HERC4-212ENST00000505760 SYN1P17600 705 aa29.59■■■□□ 2.33
HERC4-212ENST00000505760 NCAPG2Q86XI2 1143 aa29.59■■■□□ 2.33
HERC4-212ENST00000505760 GOPCQ9HD26 462 aa29.59■■■□□ 2.33
HERC4-212ENST00000505760 DDX20Q9UHI6 824 aaKnown RBP29.59■■■□□ 2.33
HERC4-212ENST00000505760 LAMA3Q16787 3333 aa29.58■■■□□ 2.33
HERC4-212ENST00000505760 RAD21O60216 631 aa29.58■■■□□ 2.33
HERC4-212ENST00000505760 APPBP2Q92624 585 aa29.58■■■□□ 2.33
HERC4-212ENST00000505760 SLC5A4Q9NY91 659 aa29.58■■■□□ 2.33
HERC4-212ENST00000505760 COL11A1P12107 1806 aaPredicted RBP29.57■■■□□ 2.32
HERC4-212ENST00000505760 RNF113AO15541 343 aaKnown RBP29.57■■■□□ 2.32
HERC4-212ENST00000505760 SBK1Q52WX2 424 aa29.57■■■□□ 2.32
HERC4-212ENST00000505760 OLFML2BQ68BL8 750 aa29.57■■■□□ 2.32
HERC4-212ENST00000505760 GIMAP6Q6P9H5 292 aa29.57■■■□□ 2.32
HERC4-212ENST00000505760 OSBP2Q969R2 916 aa29.57■■■□□ 2.32
HERC4-212ENST00000505760 GDF15Q99988 308 aa29.57■■■□□ 2.32
HERC4-212ENST00000505760 GSG1L2A8MUP6 293 aa29.56■■■□□ 2.32
HERC4-212ENST00000505760 ZFYP08048 801 aaPredicted RBP29.56■■■□□ 2.32
HERC4-212ENST00000505760 STK11IPQ8N1F8 1099 aa29.56■■■□□ 2.32
HERC4-212ENST00000505760 MKNK2Q9HBH9 465 aa29.56■■■□□ 2.32
HERC4-212ENST00000505760 ZNFX1Q9P2E3 1918 aaKnown RBP29.55■■■□□ 2.32
HERC4-212ENST00000505760 MINDY4BA8MYZ0 360 aa29.55■■■□□ 2.32
HERC4-212ENST00000505760 BMP8BP34820 402 aa29.55■■■□□ 2.32
HERC4-212ENST00000505760 ABRAQ8N0Z2 381 aa29.55■■■□□ 2.32
HERC4-212ENST00000505760 TRPV1Q8NER1 839 aa29.55■■■□□ 2.32
HERC4-212ENST00000505760 COBLO75128 1261 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms