RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 MYPNQ86TC9 1320 aa13.57□□□□□ -0.24
KDM3B-203ENST00000505756 GREB1LQ9C091 1923 aaPredicted RBP13.56□□□□□ -0.24
KDM3B-203ENST00000505756 GSPT1P15170 499 aaKnown RBP13.56□□□□□ -0.24
KDM3B-203ENST00000505756 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 SLC9C1Q4G0N8 1177 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
KDM3B-203ENST00000505756 LBX2Q6XYB7 198 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 RAET1EQ8TD07 263 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 COA7Q96BR5 231 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 TXNRD2Q9NNW7 524 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 NYAP2Q9P242 653 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 RBPJLQ9UBG7 517 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 PLIN4Q96Q06 1357 aa13.56□□□□□ -0.24
KDM3B-203ENST00000505756 MGAMO43451 1857 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 IGKV6D-41A0A0C4DH26 115 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 WDR46O15213 610 aaKnown RBP13.55□□□□□ -0.24
KDM3B-203ENST00000505756 FGAP02671 866 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 ERVK-24P63145 666 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 PRKCZQ05513 592 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 COG2Q14746 738 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 KIAA1755Q5JYT7 1200 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 TANGO6Q9C0B7 1094 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 GOPCQ9HD26 462 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
KDM3B-203ENST00000505756 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
KDM3B-203ENST00000505756 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
KDM3B-203ENST00000505756 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 RGS19P49795 217 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 SOX10P56693 466 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 IRF5Q13568 498 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 SPICE1Q8N0Z3 855 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 NEDD1Q8NHV4 660 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 CEP95Q96GE4 821 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 HOXC10Q9NYD6 342 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 SYNPO2Q9UMS6 1093 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 GABRQQ9UN88 632 aa13.54□□□□□ -0.24
KDM3B-203ENST00000505756 ORC4O43929 436 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 TTLL1O95922 423 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 FGRP09769 529 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 MAPK4P31152 587 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 GRK4P32298 578 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 FLT3LGP49771 235 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 CCNA1P78396 465 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 TFAP4Q01664 338 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 Q3C1V9 767 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 PPP4R3BQ5MIZ7 849 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 SH3TC2Q8TF17 1288 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 MKL1Q969V6 931 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 CENPFP49454 3210 aa13.53□□□□□ -0.24
KDM3B-203ENST00000505756 TSPY2A6NKD2 308 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 PEX10O60683 326 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 CNMDO75829 334 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 FLOT1O75955 427 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
KDM3B-203ENST00000505756 FAM47AQ5JRC9 791 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.25
KDM3B-203ENST00000505756 MB21D1Q8N884 522 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 PXYLP1Q8TE99 480 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 RAD50Q92878 1312 aa13.52□□□□□ -0.25
KDM3B-203ENST00000505756 F5H6K3 240 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 RAD21O60216 631 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 ADCY3O60266 1144 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 DSG3P32926 999 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 KLRC3Q07444 240 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 GMCL1P1Q8NEA9 526 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 PORCNQ9H237 461 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 INCENPQ9NQS7 918 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 BTBD7Q9P203 1132 aa13.51□□□□□ -0.25
KDM3B-203ENST00000505756 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 ZNF213O14771 459 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 RANBP6O60518 1105 aaKnown RBP13.5□□□□□ -0.25
KDM3B-203ENST00000505756 NDUFB10O96000 172 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 CHMLP26374 656 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 NT5C2P49902 561 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 HAND2P61296 217 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 UBXN2AP68543 259 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 FAM83BQ5T0W9 1011 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 AKNAD1Q5T1N1 836 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 GPR142Q7Z601 462 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 RNF41Q9H4P4 317 aaPredicted RBP13.5□□□□□ -0.25
KDM3B-203ENST00000505756 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
KDM3B-203ENST00000505756 TOMM22Q9NS69 142 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 GJD2Q9UKL4 321 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms