RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 LBHD1Q9BQE6 289 aaPredicted RBP8.85□□□□□ -0.99
VCAN-206ENST00000505615 CHMP4AQ9BY43 222 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 PICK1Q9NRD5 415 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
VCAN-206ENST00000505615 CYP2B6P20813 491 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 GCLCP48506 637 aaPredicted RBP8.84□□□□□ -0.99
VCAN-206ENST00000505615 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 CCDC57Q2TAC2 916 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 TAF7LQ5H9L4 462 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 VGLL2Q8N8G2 317 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 PROCA1Q8NCQ7 364 aaPredicted RBP8.84□□□□□ -0.99
VCAN-206ENST00000505615 STK31Q9BXU1 1019 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 MORF4L1Q9UBU8 362 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 ADAMTS8Q9UP79 889 aa8.84□□□□□ -0.99
VCAN-206ENST00000505615 PLXNA1Q9UIW2 1896 aa8.83□□□□□ -1
VCAN-206ENST00000505615 TTC24A2A3L6 582 aaPredicted RBP8.83□□□□□ -1
VCAN-206ENST00000505615 RTP1P59025 263 aa8.83□□□□□ -1
VCAN-206ENST00000505615 VPS37DQ86XT2 251 aa8.83□□□□□ -1
VCAN-206ENST00000505615 USP6NLQ92738 828 aa8.83□□□□□ -1
VCAN-206ENST00000505615 MROH5Q6ZUA9 1318 aa8.82□□□□□ -1
VCAN-206ENST00000505615 SIPA1L1O43166 1804 aa8.82□□□□□ -1
VCAN-206ENST00000505615 SMCHD1A6NHR9 2005 aa8.82□□□□□ -1
VCAN-206ENST00000505615 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
VCAN-206ENST00000505615 PEX10O60683 326 aa8.82□□□□□ -1
VCAN-206ENST00000505615 CTNND1O60716 968 aaKnown RBP8.82□□□□□ -1
VCAN-206ENST00000505615 FRAT2O75474 233 aaPredicted RBP8.82□□□□□ -1
VCAN-206ENST00000505615 ZKSCAN1P17029 563 aaPredicted RBP8.82□□□□□ -1
VCAN-206ENST00000505615 CALD1Q05682 793 aaKnown RBP8.82□□□□□ -1
VCAN-206ENST00000505615 FKBP5Q13451 457 aaPredicted RBP8.82□□□□□ -1
VCAN-206ENST00000505615 GRIN2CQ14957 1233 aa8.82□□□□□ -1
VCAN-206ENST00000505615 CCL14Q16627 93 aa8.82□□□□□ -1
VCAN-206ENST00000505615 BEND3Q5T5X7 828 aa8.82□□□□□ -1
VCAN-206ENST00000505615 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
VCAN-206ENST00000505615 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
VCAN-206ENST00000505615 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
VCAN-206ENST00000505615 KAZALD1Q96I82 304 aa8.82□□□□□ -1
VCAN-206ENST00000505615 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
VCAN-206ENST00000505615 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
VCAN-206ENST00000505615 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
VCAN-206ENST00000505615 TXNRD2Q9NNW7 524 aa8.82□□□□□ -1
VCAN-206ENST00000505615 ATP13A2Q9NQ11 1180 aa8.82□□□□□ -1
VCAN-206ENST00000505615 KIF16BQ96L93 1317 aa8.81□□□□□ -1
VCAN-206ENST00000505615 XIRP2A4UGR9 3374 aa8.81□□□□□ -1
VCAN-206ENST00000505615 DDTLA6NHG4 134 aaPredicted RBP8.81□□□□□ -1
VCAN-206ENST00000505615 APAF1O14727 1248 aa8.81□□□□□ -1
VCAN-206ENST00000505615 FGFR2P21802 821 aa8.81□□□□□ -1
VCAN-206ENST00000505615 PRDX5P30044 214 aa8.81□□□□□ -1
VCAN-206ENST00000505615 RGS3P49796 1198 aa8.81□□□□□ -1
VCAN-206ENST00000505615 WDR43Q15061 677 aaKnown RBP eCLIP8.81□□□□□ -1
VCAN-206ENST00000505615 RALBP1Q15311 655 aa8.81□□□□□ -1
VCAN-206ENST00000505615 LRRC24Q50LG9 513 aa8.81□□□□□ -1
VCAN-206ENST00000505615 CAVIN4Q5BKX8 364 aa8.81□□□□□ -1
VCAN-206ENST00000505615 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
VCAN-206ENST00000505615 SOCS4Q8WXH5 440 aa8.81□□□□□ -1
VCAN-206ENST00000505615 IDI2Q9BXS1 227 aa8.81□□□□□ -1
VCAN-206ENST00000505615 DDX4Q9NQI0 724 aaKnown RBP8.81□□□□□ -1
VCAN-206ENST00000505615 USP40Q9NVE5 1235 aa8.81□□□□□ -1
VCAN-206ENST00000505615 STK17AQ9UEE5 414 aa8.81□□□□□ -1
VCAN-206ENST00000505615 GBF1Q92538 1859 aa8.81□□□□□ -1
VCAN-206ENST00000505615 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
VCAN-206ENST00000505615 PRRC2BQ5JSZ5 2229 aaKnown RBP8.8□□□□□ -1
VCAN-206ENST00000505615 CACNA1AO00555 2505 aa8.8□□□□□ -1
VCAN-206ENST00000505615 F6X3S4 739 aa8.8□□□□□ -1
VCAN-206ENST00000505615 GRM8O00222 908 aa8.8□□□□□ -1
VCAN-206ENST00000505615 ENTPD3O75355 529 aa8.8□□□□□ -1
VCAN-206ENST00000505615 HMGCS2P54868 508 aa8.8□□□□□ -1
VCAN-206ENST00000505615 TWISTNBQ3B726 338 aaPredicted RBP8.8□□□□□ -1
VCAN-206ENST00000505615 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
VCAN-206ENST00000505615 ATXN2LQ8WWM7 1075 aaKnown RBP8.8□□□□□ -1
VCAN-206ENST00000505615 BADQ92934 168 aa8.8□□□□□ -1
VCAN-206ENST00000505615 SUCLG2Q96I99 432 aa8.8□□□□□ -1
VCAN-206ENST00000505615 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
VCAN-206ENST00000505615 ASB2Q96Q27 587 aa8.8□□□□□ -1
VCAN-206ENST00000505615 UHRF1Q96T88 793 aaPredicted RBP8.8□□□□□ -1
VCAN-206ENST00000505615 APBA2Q99767 749 aa8.8□□□□□ -1
VCAN-206ENST00000505615 PDLIM7Q9NR12 457 aa8.8□□□□□ -1
VCAN-206ENST00000505615 THEGQ9P2T0 379 aa8.8□□□□□ -1
VCAN-206ENST00000505615 LRRFIP2Q9Y608 721 aaKnown RBP8.8□□□□□ -1
VCAN-206ENST00000505615 TRANK1O15050 2925 aa8.79□□□□□ -1
VCAN-206ENST00000505615 DXOO77932 396 aaKnown RBP8.79□□□□□ -1
VCAN-206ENST00000505615 PDE8BO95263 885 aa8.79□□□□□ -1
VCAN-206ENST00000505615 CD46P15529 392 aa8.79□□□□□ -1
VCAN-206ENST00000505615 EPHB4P54760 987 aa8.79□□□□□ -1
VCAN-206ENST00000505615 SPP2Q13103 211 aa8.79□□□□□ -1
VCAN-206ENST00000505615 SNX17Q15036 470 aa8.79□□□□□ -1
VCAN-206ENST00000505615 SH3D19Q5HYK7 790 aa8.79□□□□□ -1
VCAN-206ENST00000505615 METTL24Q5JXM2 366 aa8.79□□□□□ -1
VCAN-206ENST00000505615 SH3RF1Q7Z6J0 888 aa8.79□□□□□ -1
VCAN-206ENST00000505615 WDR66Q8TBY9 1149 aa8.79□□□□□ -1
VCAN-206ENST00000505615 PORCNQ9H237 461 aa8.79□□□□□ -1
VCAN-206ENST00000505615 FLRT1Q9NZU1 646 aa8.79□□□□□ -1
VCAN-206ENST00000505615 PRKAG2Q9UGJ0 569 aa8.79□□□□□ -1
VCAN-206ENST00000505615 ATP11BQ9Y2G3 1177 aa8.79□□□□□ -1
VCAN-206ENST00000505615 CDK5RAP2Q96SN8 1893 aa8.79□□□□□ -1
VCAN-206ENST00000505615 GAKO14976 1311 aa8.79□□□□□ -1
VCAN-206ENST00000505615 TRIM43BA6NCK2 446 aa8.78□□□□□ -1
VCAN-206ENST00000505615 FAM196BA6NMK8 535 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms