RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 NLRC3Q7RTR2 1065 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 PHACTR4Q8IZ21 702 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 KIF2CQ99661 725 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 TGIF2Q9GZN2 237 aa6.09□□□□□ -1.43
LINC01088-202ENST00000505149 DUSP15Q9H1R2 295 aaPredicted RBP6.09□□□□□ -1.43
LINC01088-202ENST00000505149 TRIT1Q9H3H1 467 aaKnown RBP6.09□□□□□ -1.43
LINC01088-202ENST00000505149 MBNL3Q9NUK0 354 aaKnown RBP6.09□□□□□ -1.43
LINC01088-202ENST00000505149 RNASE1P07998 156 aaKnown RBP6.08□□□□□ -1.44
LINC01088-202ENST00000505149 RAG1P15918 1043 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 TAL1P17542 331 aaPredicted RBP6.08□□□□□ -1.44
LINC01088-202ENST00000505149 CD96P40200 585 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 SOX9P48436 509 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 RNF4P78317 190 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 IKZF1Q13422 519 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 ATG4DQ86TL0 474 aaPredicted RBP6.08□□□□□ -1.44
LINC01088-202ENST00000505149 PI4K2BQ8TCG2 481 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 ATP13A1Q9HD20 1204 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 ADAMTS6Q9UKP5 1117 aa6.08□□□□□ -1.44
LINC01088-202ENST00000505149 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
LINC01088-202ENST00000505149 H3BS24 57 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 GBP1P32455 592 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 MCM4P33991 863 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 TNNI2P48788 182 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 ZP2Q05996 745 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 PAK2Q13177 524 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 CDKAL1Q5VV42 579 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 ENOX1Q8TC92 643 aaKnown RBP6.07□□□□□ -1.44
LINC01088-202ENST00000505149 GOLGA2P5Q9HBQ8 144 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 GPATCH2Q9NW75 528 aa6.07□□□□□ -1.44
LINC01088-202ENST00000505149 TSPYL5Q86VY4 417 aaPredicted RBP6.06□□□□□ -1.44
LINC01088-202ENST00000505149 FLAD1Q8NFF5 587 aa6.06□□□□□ -1.44
LINC01088-202ENST00000505149 UBE2FQ969M7 185 aa6.06□□□□□ -1.44
LINC01088-202ENST00000505149 GPRASP2Q96D09 838 aa6.06□□□□□ -1.44
LINC01088-202ENST00000505149 CCDC120Q96HB5 630 aa6.06□□□□□ -1.44
LINC01088-202ENST00000505149 FMNL2Q96PY5 1086 aa6.06□□□□□ -1.44
LINC01088-202ENST00000505149 TM9SF2Q99805 663 aa6.06□□□□□ -1.44
LINC01088-202ENST00000505149 BIN1O00499 593 aa6.05□□□□□ -1.44
LINC01088-202ENST00000505149 ESR1P03372 595 aa6.05□□□□□ -1.44
LINC01088-202ENST00000505149 NBPF12Q5TAG4 269 aaPredicted RBP6.05□□□□□ -1.44
LINC01088-202ENST00000505149 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
LINC01088-202ENST00000505149 ANTXR1Q9H6X2 564 aa6.05□□□□□ -1.44
LINC01088-202ENST00000505149 PRR13Q9NZ81 148 aa6.05□□□□□ -1.44
LINC01088-202ENST00000505149 PAPLNO95428 1278 aa6.04□□□□□ -1.44
LINC01088-202ENST00000505149 LRRN4CLQ8ND94 238 aa6.04□□□□□ -1.44
LINC01088-202ENST00000505149 SEC16BQ96JE7 1060 aa6.04□□□□□ -1.44
LINC01088-202ENST00000505149 FERD3LQ96RJ6 166 aa6.04□□□□□ -1.44
LINC01088-202ENST00000505149 SLC9A7Q96T83 725 aa6.04□□□□□ -1.44
LINC01088-202ENST00000505149 CARS2Q9HA77 564 aaKnown RBP6.04□□□□□ -1.44
LINC01088-202ENST00000505149 RC3H2Q9HBD1 1191 aaKnown RBP6.04□□□□□ -1.44
LINC01088-202ENST00000505149 ZSWIM5Q9P217 1185 aa6.04□□□□□ -1.44
LINC01088-202ENST00000505149 LRRN2O75325 713 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 CLEC3AO75596 197 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 ACRP10323 421 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 TCF3P15923 654 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 TPP2P29144 1249 aaPredicted RBP6.03□□□□□ -1.44
LINC01088-202ENST00000505149 POLR2BP30876 1174 aaKnown RBP6.03□□□□□ -1.44
LINC01088-202ENST00000505149 GDNFP39905 211 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 NBPF9Q3BBW0 867 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 C19orf47Q8N9M1 422 aaKnown RBP6.03□□□□□ -1.44
LINC01088-202ENST00000505149 OR6P1Q8NGX9 317 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 SYTL5Q8TDW5 730 aaPredicted RBP6.03□□□□□ -1.44
LINC01088-202ENST00000505149 ASIC4Q96FT7 647 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 DHRS1Q96LJ7 313 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 ALPK1Q96QP1 1244 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 GINM1Q9NU53 330 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 CTNND2Q9UQB3 1225 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 ZNF281Q9Y2X9 895 aa6.03□□□□□ -1.44
LINC01088-202ENST00000505149 PAX4O43316 350 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 GUCY2CP25092 1073 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 GIPRP48546 466 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 CHMP4BP1P59074 171 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 TMEM192Q8IY95 271 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 DAGLBQ8NCG7 672 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 SMARCC1Q92922 1105 aaPredicted RBP6.02□□□□□ -1.45
LINC01088-202ENST00000505149 HDAC8Q9BY41 377 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 IGSF5Q9NSI5 407 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 C19orf73Q9NVV2 129 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 SUCOQ9UBS9 1254 aaKnown RBP6.02□□□□□ -1.45
LINC01088-202ENST00000505149 STRIP2Q9ULQ0 834 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 PPT2Q9UMR5 302 aa6.02□□□□□ -1.45
LINC01088-202ENST00000505149 NMIQ13287 307 aaPredicted RBP6.01□□□□□ -1.45
LINC01088-202ENST00000505149 ANKRD39Q53RE8 183 aa6.01□□□□□ -1.45
LINC01088-202ENST00000505149 C9orf131Q5VYM1 1079 aa6.01□□□□□ -1.45
LINC01088-202ENST00000505149 LSRQ86X29 649 aaPredicted RBP6.01□□□□□ -1.45
LINC01088-202ENST00000505149 ZNF655Q8N720 491 aaPredicted RBP6.01□□□□□ -1.45
LINC01088-202ENST00000505149 SLC6A18Q96N87 628 aa6.01□□□□□ -1.45
LINC01088-202ENST00000505149 CCSER2Q9H7U1 834 aa6.01□□□□□ -1.45
LINC01088-202ENST00000505149 PODXL2Q9NZ53 605 aa6.01□□□□□ -1.45
LINC01088-202ENST00000505149 DUSP13Q9UII6 198 aa6.01□□□□□ -1.45
LINC01088-202ENST00000505149 EFR3BQ9Y2G0 817 aa6.01□□□□□ -1.45
LINC01088-202ENST00000505149 SHISA3A0PJX4 238 aa6□□□□□ -1.45
LINC01088-202ENST00000505149 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
LINC01088-202ENST00000505149 PMS1P54277 932 aaKnown RBP6□□□□□ -1.45
LINC01088-202ENST00000505149 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
LINC01088-202ENST00000505149 ACBD3Q9H3P7 528 aa6□□□□□ -1.45
LINC01088-202ENST00000505149 PRDM7Q9NQW5 492 aa6□□□□□ -1.45
LINC01088-202ENST00000505149 TMEM59LQ9UK28 342 aa6□□□□□ -1.45
LINC01088-202ENST00000505149 SLC12A7Q9Y666 1083 aa6□□□□□ -1.45
LINC01088-202ENST00000505149 WASH4PA8MWX3 477 aa5.99□□□□□ -1.45
LINC01088-202ENST00000505149 SIGLEC6O43699 453 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms