RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 RAPGEF4Q8WZA2 1011 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 SNX21Q969T3 373 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 ATP13A2Q9NQ11 1180 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 CHMP5Q9NZZ3 219 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 CHPF2Q9P2E5 772 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 OVOS2A0A0G2JMS6 1433 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 ZNF335Q9H4Z2 1342 aaPredicted RBP6.84□□□□□ -1.31
SNX25-203ENST00000504959 SCN11AQ9UI33 1791 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 TMEM94Q12767 1356 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 ENC1O14682 589 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 KCNQ3O43525 872 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 MMP20O60882 483 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 TRPA1O75762 1119 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
SNX25-203ENST00000504959 SDSP20132 328 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 CHMP4BP1P59074 171 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 GRIN2CQ14957 1233 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 OR13H1Q8NG92 308 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 DNAJC7Q99615 494 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 GPAMQ9HCL2 828 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 TIMMDC1Q9NPL8 285 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 DBF4Q9UBU7 674 aaPredicted RBP6.84□□□□□ -1.31
SNX25-203ENST00000504959 MSRB2Q9Y3D2 182 aa6.84□□□□□ -1.31
SNX25-203ENST00000504959 PXDNQ92626 1479 aa6.84□□□□□ -1.32
SNX25-203ENST00000504959 LTBP4Q8N2S1 1624 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 PNMA6EA0A0J9YXQ4 647 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 METTL12A8MUP2 240 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 DNAJC6O75061 913 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 REC8O95072 547 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 GRIA4P48058 902 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 PDE1AP54750 535 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 SEZ6Q53EL9 994 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 CCNJLQ8IV13 435 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 FBXO27Q8NI29 283 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 DNAAF4Q8WXU2 420 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 HPS1Q92902 700 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 PLD4Q96BZ4 506 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 USP44Q9H0E7 712 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 RUBCNLQ9H714 662 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 SPC25Q9HBM1 224 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 ST7Q9NRC1 585 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 R3HCC1Q9Y3T6 440 aaKnown RBP6.83□□□□□ -1.32
SNX25-203ENST00000504959 GJA3Q9Y6H8 435 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 DCCP43146 1447 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 MST1RQ04912 1400 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 NPHP3Q7Z494 1330 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 CRYBG1Q9Y4K1 1723 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 ESYT3A0FGR9 886 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 PI4KAP2A4QPH2 592 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 PHF20L1A8MW92 1017 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 PAGE1O75459 146 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 MX1P20591 662 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 LMNB2Q03252 620 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 WDR44Q5JSH3 913 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 COL13A1Q5TAT6 717 aaPredicted RBP6.83□□□□□ -1.32
SNX25-203ENST00000504959 TTBK2Q6IQ55 1244 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 FAM196AQ6ZSG2 479 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 LYSMD3Q7Z3D4 306 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 SLITRK4Q8IW52 837 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 FAM43AQ8N2R8 423 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 PI4KAP1Q8N8J0 262 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 DDX17Q92841 729 aaKnown RBP6.83□□□□□ -1.32
SNX25-203ENST00000504959 NKD1Q969G9 470 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 ZFATQ9P243 1243 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 TUBGCP6Q96RT7 1819 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 NCOA3Q9Y6Q9 1424 aa6.83□□□□□ -1.32
SNX25-203ENST00000504959 ERC2O15083 957 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 TLR3O15455 904 aaKnown RBP6.82□□□□□ -1.32
SNX25-203ENST00000504959 PARNO95453 639 aaKnown RBP6.82□□□□□ -1.32
SNX25-203ENST00000504959 DDX58O95786 925 aaKnown RBP6.82□□□□□ -1.32
SNX25-203ENST00000504959 ANXA1P04083 346 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 RABEP1Q15276 862 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 KANK3Q6NY19 840 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 AGMOQ6ZNB7 445 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 LRP10Q7Z4F1 713 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 RILPL2Q969X0 211 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 OSMRQ99650 979 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 METTL14Q9HCE5 456 aaKnown RBP6.82□□□□□ -1.32
SNX25-203ENST00000504959 C9orf78Q9NZ63 289 aaPredicted RBP6.82□□□□□ -1.32
SNX25-203ENST00000504959 HDAC5Q9UQL6 1122 aa6.82□□□□□ -1.32
SNX25-203ENST00000504959 IBTKQ9P2D0 1353 aaPredicted RBP6.82□□□□□ -1.32
SNX25-203ENST00000504959 TNS3Q68CZ2 1445 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 COL18A1P39060 1754 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 SRGAP3O43295 1099 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 SURF6O75683 361 aaKnown RBP6.81□□□□□ -1.32
SNX25-203ENST00000504959 WFS1O76024 890 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 OS9Q13438 667 aaPredicted RBP6.81□□□□□ -1.32
SNX25-203ENST00000504959 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 BEND3Q5T5X7 828 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 L1TD1Q5T7N2 865 aaKnown RBP6.81□□□□□ -1.32
SNX25-203ENST00000504959 BNC2Q6ZN30 1099 aaPredicted RBP6.81□□□□□ -1.32
SNX25-203ENST00000504959 PPP1R42Q7Z4L9 355 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
SNX25-203ENST00000504959 HHIPQ96QV1 700 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 KIF2CQ99661 725 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 USP26Q9BXU7 913 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 C11orf16Q9NQ32 467 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 DZANK1Q9NVP4 752 aa6.81□□□□□ -1.32
SNX25-203ENST00000504959 HYPKQ9NX55 129 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms