RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 NLRP2Q9NX02 1062 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 SRRDQ9UH36 339 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 TOP2AP11388 1531 aaKnown RBP5.75□□□□□ -1.49
RFC1-208ENST00000504849 RIMBP3CA6NJZ7 1639 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 RIMBP3BA6NNM3 1639 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 RIMBP3Q9UFD9 1639 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 TMEM238LA0A1B0GVL6 79 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 LRIG2O94898 1065 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 P4HBP07237 508 aaKnown RBP5.75□□□□□ -1.49
RFC1-208ENST00000504849 ZGLP1P0C6A0 271 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 EPHB3P54753 998 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 FMR1Q06787 632 aaKnown RBP eCLIP5.75□□□□□ -1.49
RFC1-208ENST00000504849 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 ZNF252P-AS1Q0IIN9 211 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 MPRIPQ6WCQ1 1025 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 TMPRSS7Q7RTY8 843 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 HIRIP3Q9BW71 556 aaPredicted RBP5.75□□□□□ -1.49
RFC1-208ENST00000504849 TANGO6Q9C0B7 1094 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
RFC1-208ENST00000504849 NPHS2Q9NP85 383 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 IRAK3Q9Y616 596 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 GOLGA3Q08378 1498 aa5.75□□□□□ -1.49
RFC1-208ENST00000504849 TREHO43280 583 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 NDUFB5O43674 189 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 XPCQ01831 940 aaPredicted RBP5.74□□□□□ -1.49
RFC1-208ENST00000504849 TNK2Q07912 1038 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 NR0B2Q15466 257 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 MAP1SQ66K74 1059 aaPredicted RBP5.74□□□□□ -1.49
RFC1-208ENST00000504849 GIMAP6Q6P9H5 292 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 RIN3Q8TB24 985 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 FBXO41Q8TF61 875 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 SHISA4Q96DD7 197 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 TGIF2Q9GZN2 237 aa5.74□□□□□ -1.49
RFC1-208ENST00000504849 TPX2Q9ULW0 747 aaKnown RBP5.74□□□□□ -1.49
RFC1-208ENST00000504849 WIZO95785 1651 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 CILPO75339 1184 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 PRPF40AO75400 957 aaKnown RBP5.73□□□□□ -1.49
RFC1-208ENST00000504849 LDLRAD1Q5T700 205 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 TMC7Q7Z402 723 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 METTL16Q86W50 562 aaKnown RBP5.73□□□□□ -1.49
RFC1-208ENST00000504849 C12orf40Q86WS4 652 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 NT5DC4Q86YG4 428 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 SULF2Q8IWU5 870 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 TMEM87AQ8NBN3 555 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 TP53I13Q8NBR0 393 aaPredicted RBP5.73□□□□□ -1.49
RFC1-208ENST00000504849 TINF2Q9BSI4 451 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 SCAND2PQ9GZW5 306 aaPredicted RBP5.73□□□□□ -1.49
RFC1-208ENST00000504849 MRS2Q9HD23 443 aa5.73□□□□□ -1.49
RFC1-208ENST00000504849 CNOT11Q9UKZ1 510 aaKnown RBP5.73□□□□□ -1.49
RFC1-208ENST00000504849 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
RFC1-208ENST00000504849 DCDC2CA8MYV0 355 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 IRS4O14654 1257 aaPredicted RBP5.72□□□□□ -1.49
RFC1-208ENST00000504849 FANCGO15287 622 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 GRIN3BO60391 1043 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 CBX7O95931 251 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 FSHBP01225 129 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 GNL2Q13823 731 aaKnown RBP5.72□□□□□ -1.49
RFC1-208ENST00000504849 GAB4Q2WGN9 574 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 CYB5RLQ6IPT4 315 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 TMC4Q7Z404 712 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 TMEFF1Q8IYR6 380 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 RNF34Q969K3 372 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 DMRTB1Q96MA1 342 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 YTHDC1Q96MU7 727 aaKnown RBP5.72□□□□□ -1.49
RFC1-208ENST00000504849 TMEM39AQ9NV64 488 aa5.72□□□□□ -1.49
RFC1-208ENST00000504849 SORBS3O60504 671 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 ATP2B1P20020 1258 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 ARNTP27540 789 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 PDE6BP35913 854 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 AAMPQ13685 434 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 C9orf131Q5VYM1 1079 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 GMLQ99445 158 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 MIPEPQ99797 713 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 CCSER2Q9H7U1 834 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 FBRSQ9HAH7 460 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 BRPF3Q9ULD4 1205 aa5.71□□□□□ -1.5
RFC1-208ENST00000504849 FITM1A5D6W6 292 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 EFEMP2O95967 443 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 LDHBP07195 334 aaKnown RBP5.7□□□□□ -1.5
RFC1-208ENST00000504849 GALK1P51570 392 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 DAB2P98082 770 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 FANCCQ00597 558 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 SLBPQ14493 270 aaKnown RBP eCLIP5.7□□□□□ -1.5
RFC1-208ENST00000504849 DSC3Q14574 896 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 SOGA3Q5TF21 947 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 CREG2Q8IUH2 290 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 LNPKQ9C0E8 428 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 PARP2Q9UGN5 583 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 CCDC88BA6NC98 1476 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 CEP164Q9UPV0 1460 aa5.7□□□□□ -1.5
RFC1-208ENST00000504849 K7ESM1 405 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 N4BP3O15049 544 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 SLPIP03973 132 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 ZNF76P36508 570 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 MAGEA10P43363 369 aaPredicted RBP5.69□□□□□ -1.5
RFC1-208ENST00000504849 HMGA2P52926 109 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 ADAM17P78536 824 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 ATP2B2Q01814 1243 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 PLCB3Q01970 1234 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 PPP2R3AQ06190 1150 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms