RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 M0R2C6 588 aa15.38■□□□□ 0.05
RNF4-206ENST00000504782 XRCC5P13010 732 aaKnown RBP15.38■□□□□ 0.05
RNF4-206ENST00000504782 CCND3P30281 292 aaPredicted RBP15.38■□□□□ 0.05
RNF4-206ENST00000504782 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
RNF4-206ENST00000504782 WDR78Q5VTH9 848 aa15.38■□□□□ 0.05
RNF4-206ENST00000504782 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
RNF4-206ENST00000504782 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
RNF4-206ENST00000504782 CCAR1Q8IX12 1150 aaKnown RBP15.38■□□□□ 0.05
RNF4-206ENST00000504782 SOCS4Q8WXH5 440 aa15.38■□□□□ 0.05
RNF4-206ENST00000504782 CRBNQ96SW2 442 aa15.38■□□□□ 0.05
RNF4-206ENST00000504782 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.38■□□□□ 0.05
RNF4-206ENST00000504782 TANGO6Q9C0B7 1094 aa15.38■□□□□ 0.05
RNF4-206ENST00000504782 ZNFX1Q9P2E3 1918 aaKnown RBP15.37■□□□□ 0.05
RNF4-206ENST00000504782 RNF113AO15541 343 aaKnown RBP15.37■□□□□ 0.05
RNF4-206ENST00000504782 EEF2P13639 858 aaKnown RBP15.37■□□□□ 0.05
RNF4-206ENST00000504782 ZKSCAN1P17029 563 aaPredicted RBP15.37■□□□□ 0.05
RNF4-206ENST00000504782 PTPREP23469 700 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 RGS2P41220 211 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 ICA1Q05084 483 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 MAP2K5Q13163 448 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 COG2Q14746 738 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 NPLOC4Q8TAT6 608 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 PI4K2BQ8TCG2 481 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 SEC62Q99442 399 aaKnown RBP15.37■□□□□ 0.05
RNF4-206ENST00000504782 HTATIP2Q9BUP3 242 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 EPB41L4AQ9HCS5 686 aaPredicted RBP15.37■□□□□ 0.05
RNF4-206ENST00000504782 TMX2Q9Y320 296 aa15.37■□□□□ 0.05
RNF4-206ENST00000504782 FXR1P51114 621 aaKnown RBP eCLIP15.36■□□□□ 0.05
RNF4-206ENST00000504782 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
RNF4-206ENST00000504782 APPBP2Q92624 585 aa15.36■□□□□ 0.05
RNF4-206ENST00000504782 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
RNF4-206ENST00000504782 APBA2Q99767 749 aa15.36■□□□□ 0.05
RNF4-206ENST00000504782 MOV10L1Q9BXT6 1211 aaKnown RBP15.36■□□□□ 0.05
RNF4-206ENST00000504782 VCPKMTQ9H867 229 aa15.36■□□□□ 0.05
RNF4-206ENST00000504782 CWC22Q9HCG8 908 aaKnown RBP15.36■□□□□ 0.05
RNF4-206ENST00000504782 CEP290O15078 2479 aa15.36■□□□□ 0.05
RNF4-206ENST00000504782 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 SLC15A5A6NIM6 579 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 MINDY4BA8MYZ0 360 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 DSG3P32926 999 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 CCNA1P78396 465 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 ATP2B2Q01814 1243 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 LHX8Q68G74 356 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 CCDC17Q96LX7 622 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
RNF4-206ENST00000504782 ARHGEF10LQ9HCE6 1279 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 FBXO28Q9NVF7 368 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 RBM27Q9P2N5 1060 aaKnown RBP15.35■□□□□ 0.05
RNF4-206ENST00000504782 OGDHLQ9ULD0 1010 aa15.35■□□□□ 0.05
RNF4-206ENST00000504782 GPAA1O43292 621 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 FLOT1O75955 427 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 RASA1P20936 1047 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 GRB14Q14449 540 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 SBK1Q52WX2 424 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 NECAB2Q7Z6G3 386 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 AMOTL1Q8IY63 956 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 GPATCH3Q96I76 525 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 SPATC1LQ9H0A9 340 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 HOXC10Q9NYD6 342 aa15.34■□□□□ 0.05
RNF4-206ENST00000504782 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
RNF4-206ENST00000504782 ZNF236Q9UL36 1845 aa15.33■□□□□ 0.05
RNF4-206ENST00000504782 EVI5O60447 810 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 PRDM1O75626 825 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 IGHA2P01877 340 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 ERCC3P19447 782 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 CYP2C19P33261 490 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 PLS1Q14651 629 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.04
RNF4-206ENST00000504782 TRPV1Q8NER1 839 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 LPAR1Q92633 364 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 PRO3102Q9H379 93 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 KANSL2Q9H9L4 492 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 PFASO15067 1338 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 TTC41PQ6P2S7 1318 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 SALL3Q9BXA9 1300 aa15.33■□□□□ 0.04
RNF4-206ENST00000504782 RAD21O60216 631 aa15.32■□□□□ 0.04
RNF4-206ENST00000504782 COBLO75128 1261 aa15.32■□□□□ 0.04
RNF4-206ENST00000504782 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
RNF4-206ENST00000504782 ANKLE1Q8NAG6 615 aa15.32■□□□□ 0.04
RNF4-206ENST00000504782 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
RNF4-206ENST00000504782 IVNS1ABPQ9Y6Y0 642 aa15.32■□□□□ 0.04
RNF4-206ENST00000504782 ROBO3Q96MS0 1386 aa15.32■□□□□ 0.04
RNF4-206ENST00000504782 PLXNA1Q9UIW2 1896 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 WDR46O15213 610 aaKnown RBP15.31■□□□□ 0.04
RNF4-206ENST00000504782 GLRX3O76003 335 aaKnown RBP15.31■□□□□ 0.04
RNF4-206ENST00000504782 APPP05067 770 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 ZFYP08048 801 aaPredicted RBP15.31■□□□□ 0.04
RNF4-206ENST00000504782 HOXC6P09630 235 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 MX1P20591 662 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 ADORA2AP29274 412 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 FAM83BQ5T0W9 1011 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 ANKRD45Q5TZF3 282 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 CCDC129Q6ZRS4 1044 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 C7orf61Q8IZ16 206 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 IFNL3Q8IZI9 196 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 C11orf49Q9H6J7 331 aa15.31■□□□□ 0.04
RNF4-206ENST00000504782 ADAMTS5Q9UNA0 930 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms