RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 PANK3Q9H999 370 aa6.63□□□□□ -1.35
OTUD4-204ENST00000504331 CLSPNQ9HAW4 1339 aa6.63□□□□□ -1.35
OTUD4-204ENST00000504331 RNF186Q9NXI6 227 aa6.63□□□□□ -1.35
OTUD4-204ENST00000504331 NPC1L1Q9UHC9 1359 aa6.63□□□□□ -1.35
OTUD4-204ENST00000504331 CNOT7Q9UIV1 285 aaKnown RBP6.63□□□□□ -1.35
OTUD4-204ENST00000504331 ATP6V0A2Q9Y487 856 aa6.63□□□□□ -1.35
OTUD4-204ENST00000504331 SNED1Q8TER0 1413 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 CEMIPQ8WUJ3 1361 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
OTUD4-204ENST00000504331 CXCL9Q07325 125 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 HABP4Q5JVS0 413 aaKnown RBP6.62□□□□□ -1.35
OTUD4-204ENST00000504331 Q6ZS46 218 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 POU5F2Q8N7G0 328 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 ZNF280CQ8ND82 737 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 IL17REQ8NFR9 667 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 RHPN1Q8TCX5 695 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 RAXQ9Y2V3 346 aa6.62□□□□□ -1.35
OTUD4-204ENST00000504331 COL11A2P13942 1736 aaPredicted RBP6.62□□□□□ -1.35
OTUD4-204ENST00000504331 FAM155AB1AL88 458 aaPredicted RBP6.61□□□□□ -1.35
OTUD4-204ENST00000504331 TRAF5O00463 557 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 GSC2O15499 205 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 TRPA1O75762 1119 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 TM4SF4P48230 202 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 EPHA4P54764 986 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 EIF4G2P78344 907 aaKnown RBP eCLIP6.61□□□□□ -1.35
OTUD4-204ENST00000504331 SREBF2Q12772 1141 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 HSP90AB3PQ58FF7 597 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 KIF6Q6ZMV9 814 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 KRT26Q7Z3Y9 468 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 CCER1Q8TC90 406 aaPredicted RBP6.61□□□□□ -1.35
OTUD4-204ENST00000504331 CSRNP1Q96S65 589 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 EYA3Q99504 573 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 LPIN3Q9BQK8 851 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 NUDCQ9Y266 331 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 USP16Q9Y5T5 823 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 CACNA1SQ13698 1873 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 BCORQ6W2J9 1755 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 LTBP1Q14766 1721 aa6.61□□□□□ -1.35
OTUD4-204ENST00000504331 PITPNM2Q9BZ72 1349 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 SFI1A8K8P3 1242 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 F8W735 103 aaPredicted RBP6.6□□□□□ -1.35
OTUD4-204ENST00000504331 NEFMP07197 916 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 NF2P35240 595 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 SOX10P56693 466 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 TBCELQ5QJ74 424 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 DPP8Q6V1X1 898 aaPredicted RBP6.6□□□□□ -1.35
OTUD4-204ENST00000504331 GLIS2Q9BZE0 524 aaPredicted RBP6.6□□□□□ -1.35
OTUD4-204ENST00000504331 ZNF232Q9UNY5 417 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 PCDHGA11Q9Y5H2 935 aa6.6□□□□□ -1.35
OTUD4-204ENST00000504331 MAP3K15Q6ZN16 1313 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 FKTNO75072 461 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 GMPSP49915 693 aaPredicted RBP6.59□□□□□ -1.35
OTUD4-204ENST00000504331 TAF7Q15545 349 aaPredicted RBP6.59□□□□□ -1.35
OTUD4-204ENST00000504331 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 OTUD7BQ6GQQ9 843 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 DDX46Q7L014 1031 aaKnown RBP6.59□□□□□ -1.35
OTUD4-204ENST00000504331 USP48Q86UV5 1035 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 WFDC8Q8IUA0 241 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 SLC9A9Q8IVB4 645 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 TMEM130Q8N3G9 435 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 AGBL3Q8NEM8 1001 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 CLUAP1Q96AJ1 413 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 CFAP53Q96M91 514 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 PNNQ9H307 717 aaKnown RBP6.59□□□□□ -1.35
OTUD4-204ENST00000504331 ZNF408Q9H9D4 720 aa6.59□□□□□ -1.35
OTUD4-204ENST00000504331 PRR19A6NJB7 356 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 WNT11O96014 354 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 HMOX1P09601 288 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 HIRAP54198 1017 aaPredicted RBP6.58□□□□□ -1.36
OTUD4-204ENST00000504331 AOC3Q16853 763 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 WASHC4Q2M389 1173 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 FAM35AQ86V20 835 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 ZNF34Q8IZ26 560 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 ABI1Q8IZP0 508 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 PLPP7Q8NBV4 271 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 CHMP4AQ9BY43 222 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 GOPCQ9HD26 462 aa6.58□□□□□ -1.36
OTUD4-204ENST00000504331 CPB1P15086 417 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 TCIRG1Q13488 830 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 PERM1Q5SV97 790 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 SPOCD1Q6ZMY3 1216 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 RETREG2Q8NC44 543 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 UTP14AQ9BVJ6 771 aaKnown RBP6.57□□□□□ -1.36
OTUD4-204ENST00000504331 MRPL18Q9H0U6 180 aaKnown RBP6.57□□□□□ -1.36
OTUD4-204ENST00000504331 ZNF358Q9NW07 568 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 BABAM1Q9NWV8 329 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 ZNF609O15014 1411 aa6.57□□□□□ -1.36
OTUD4-204ENST00000504331 POLR2AP24928 1970 aaKnown RBP6.57□□□□□ -1.36
OTUD4-204ENST00000504331 A0A1W2PPC1 479 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 SERTM1A2A2V5 107 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 PRAMEF22A3QJZ6 481 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 MANSC4A6NHS7 340 aaPredicted RBP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 VIL1P09327 827 aaKnown RBP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 GRIK1P39086 918 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 FMR1Q06787 632 aaKnown RBP eCLIP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 NFIAQ12857 509 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 GRAPQ13588 217 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 MAP7D1Q3KQU3 841 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 ARMC9Q7Z3E5 817 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms