RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FEZ1Q99689 392 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 TMX2Q9Y320 296 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 PAPPA2Q9BXP8 1791 aa16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 GOLGA8BA8MQT2 603 aa16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 RCAN1P53805 252 aa16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 PPATQ06203 517 aa16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 SPP2Q13103 211 aa16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
CYSTM1-202ENST00000504227 GREB1LQ9C091 1923 aaPredicted RBP16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 A0A1W2PRG0 241 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 SPDYE5A6NIY4 337 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 TMEM88BA6NKF7 163 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 GOLGA8AA7E2F4 631 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 K7ELQ4 463 aaPredicted RBP16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 RAD21O60216 631 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 KIF5BP33176 963 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 ECE1P42892 770 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 USP14P54578 494 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 HUNKP57058 714 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 STK3Q13188 491 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 ME3Q16798 604 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 MICU3Q86XE3 530 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 GMCL1P1Q8NEA9 526 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 TMX3Q96JJ7 454 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 KIAA1683Q9H0B3 1180 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 MTMR7Q9Y216 660 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 AFG3L2Q9Y4W6 797 aa16.17■□□□□ 0.18
CYSTM1-202ENST00000504227 DOCK1Q14185 1865 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 CCDC196A0A1B0GTZ2 297 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 C19orf81C9J6K1 198 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 F5H6K3 240 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 CXCL11O14625 94 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 PFKFB2O60825 505 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 METAP2P50579 478 aaKnown RBP eCLIP16.16■□□□□ 0.186e-6■□□□□ 10.3
CYSTM1-202ENST00000504227 BACE1P56817 501 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 KLRC3Q07444 240 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 TROAPQ12815 778 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 PPIL2Q13356 520 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 SLFN13Q68D06 897 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 USP17L2Q6R6M4 530 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 RAB11FIP4Q86YS3 637 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 FANCBQ8NB91 859 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 CTCFLQ8NI51 663 aaPredicted RBP16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 OTUD5Q96G74 571 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 MAP3K14Q99558 947 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 MYL10Q9BUA6 226 aa16.16■□□□□ 0.18
CYSTM1-202ENST00000504227 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 RXRAP19793 462 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 CCT2P78371 535 aaKnown RBP16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 MTMR2Q13614 643 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 ZYXQ15942 572 aaKnown RBP16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 RTN1Q16799 776 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 CCDC144CPQ8IYA2 1237 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 DCAF4Q8WV16 495 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 OPTNQ96CV9 577 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 DAXXQ9UER7 740 aaPredicted RBP16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 HPS5Q9UPZ3 1129 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
CYSTM1-202ENST00000504227 LARGE1O95461 756 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 NDUFB10O96000 172 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 SLC1A4P43007 532 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 GNAQP50148 359 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 GRM4Q14833 912 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 CCDC96Q2M329 555 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 SAPCD2Q86UD0 394 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 NECAB1Q8N987 351 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 LPAR1Q92633 364 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 GTF3C6Q969F1 213 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 GMCL1Q96IK5 515 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 RBM28Q9NW13 759 aaKnown RBP16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 TMOD4Q9NZQ9 345 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 ABT1Q9ULW3 272 aaKnown RBP16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 TLL2Q9Y6L7 1015 aa16.14■□□□□ 0.17
CYSTM1-202ENST00000504227 CPLX1O14810 134 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 IRF6O14896 467 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 SNHG28P0DPA3 235 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 PDHBP11177 359 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 ZNF157P51786 506 aaPredicted RBP16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 HMGCS2P54868 508 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 SCRN1Q12765 414 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 ASPRV1Q53RT3 343 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 GPATCH4Q5T3I0 446 aaKnown RBP16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 CPLX2Q6PUV4 134 aaKnown RBP16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 SPICE1Q8N0Z3 855 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 WNK4Q96J92 1243 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 NCOA5Q9HCD5 579 aaKnown RBP16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 KCNH4Q9UQ05 1017 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 MYH4Q9Y623 1939 aa16.13■□□□□ 0.17
CYSTM1-202ENST00000504227 HSP90AA1P07900 732 aaKnown RBP16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 BMP3P12645 472 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms